RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MYL4P12829 197 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 ARFIP2P53365 341 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 RAP2BP61225 183 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 CTBP1Q13363 440 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 SLC35G1Q2M3R5 365 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 AMOTQ4VCS5 1084 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 MFSD14BQ5SR56 506 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 ARTNQ5T4W7 220 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 WDR78Q5VTH9 848 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 ZNF529Q6P280 563 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 MMS22LQ6ZRQ5 1243 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 UNC13DQ70J99 1090 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 UBE3BQ7Z3V4 1068 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 KLHL36Q8N4N3 616 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 ATXN2LQ8WWM7 1075 aaKnown RBP6.24□□□□□ -1.41
CPSF6-206ENST00000550987 TRIM43Q96BQ3 446 aaPredicted RBP6.24□□□□□ -1.41
CPSF6-206ENST00000550987 YTHDC1Q96MU7 727 aaKnown RBP6.24□□□□□ -1.41
CPSF6-206ENST00000550987 EIF2AQ9BY44 585 aaKnown RBP6.24□□□□□ -1.41
CPSF6-206ENST00000550987 GCM1Q9NP62 436 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 SLC39A10Q9ULF5 831 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 HDAC5Q9UQL6 1122 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 MAN2B2Q9Y2E5 1009 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 MED16Q9Y2X0 877 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 NR2E1Q9Y466 385 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 PAXBP1Q9Y5B6 917 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 CHD6Q8TD26 2715 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 ARHGAP31Q2M1Z3 1444 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 KIAA1107Q9UPP5 1409 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 KIF7Q2M1P5 1343 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 COL18A1P39060 1754 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 NHSQ6T4R5 1651 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 SLC26A4O43511 780 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 PLA2G6O60733 806 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 SNRPA1P09661 255 aaKnown RBP6.23□□□□□ -1.41
CPSF6-206ENST00000550987 RARBP10826 455 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 MAP2K2P36507 400 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 PPFIA1Q13136 1202 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 KIF22Q14807 665 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 PFKFB4Q16877 469 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 SLC4A8Q2Y0W8 1093 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 RRAGBQ5VZM2 374 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 OTUD7BQ6GQQ9 843 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 ANKRD18AQ8IVF6 992 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 SLC15A4Q8N697 577 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 TEX19Q8NA77 164 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 ATG16L2Q8NAA4 619 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 TBC1D20Q96BZ9 403 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 LRRC46Q96FV0 321 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 CEP95Q96GE4 821 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 HEPHQ9BQS7 1158 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 ISCA1Q9BUE6 129 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 ZFP64Q9NPA5 681 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 A1CFQ9NQ94 594 aaKnown RBP6.23□□□□□ -1.41
CPSF6-206ENST00000550987 ZNF212Q9UDV6 495 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
CPSF6-206ENST00000550987 ITSN1Q15811 1721 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 CLTCL1P53675 1640 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 ATRNL1Q5VV63 1379 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 GOLGA6L3A6NEY3 463 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 PYCARD-AS1I3L0S3 204 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 ARHGAP6O43182 974 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 SLC43A1O75387 559 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 UNC5CO95185 931 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 ABHD16AO95870 558 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 POMCP01189 267 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 ALAS1P13196 640 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 CSF2RBP32927 897 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 POU6F2P78424 691 aaPredicted RBP6.22□□□□□ -1.41
CPSF6-206ENST00000550987 LMOD3Q0VAK6 560 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 ZACNQ401N2 412 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 SEM1Q6ZVN7 128 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 RALYLQ86SE5 291 aaKnown RBP6.22□□□□□ -1.41
CPSF6-206ENST00000550987 NBPF11Q86T75 865 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 TMEFF1Q8IYR6 380 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 FANCBQ8NB91 859 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 TXNDC5Q8NBS9 432 aaKnown RBP6.22□□□□□ -1.41
CPSF6-206ENST00000550987 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 C1QTNF1Q9BXJ1 281 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 C12orf65Q9H3J6 166 aaKnown RBP6.22□□□□□ -1.41
CPSF6-206ENST00000550987 GSTO2Q9H4Y5 243 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.22□□□□□ -1.41
CPSF6-206ENST00000550987 TFCP2L1Q9NZI6 479 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 ADAM29Q9UKF5 820 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 TMX2Q9Y320 296 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 CFAP54Q96N23 3096 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 KIF1AQ12756 1690 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 GCC2Q8IWJ2 1684 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 BCL9O00512 1426 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 KIF13BQ9NQT8 1826 aa6.22□□□□□ -1.41
CPSF6-206ENST00000550987 UBE2QL1A1L167 161 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF785A8K8V0 405 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 CXorf49A8MYA2 514 aaPredicted RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 PODXLO00592 558 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 WNT10BO00744 389 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 GRPP07492 148 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 IDEP14735 1019 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 CARSP49589 748 aaKnown RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 HTRA4P83105 476 aaPredicted RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 MRPL49Q13405 166 aaKnown RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 PRKG1Q13976 671 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms