RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 ELMOD1Q8N336 334 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 WHAMMQ8TF30 809 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 SUSD6Q92537 303 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 KAT5Q92993 513 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 PCED1BQ96HM7 432 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 FUBP3Q96I24 572 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 RHOBTB2Q9BYZ6 727 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 FAM124BQ9H5Z6 455 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 ABCB6Q9NP58 842 aa17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 UBE2TQ9NPD8 197 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-209ENST00000550872 REV3LO60673 3130 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 DOCK6Q96HP0 2047 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 LRRC10BA6NIK2 292 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 GOLGA6L19H0YKK7 550 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 PAPLNO95428 1278 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 EPHB3P54753 998 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 GCNT1Q02742 428 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 CBX2Q14781 532 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 SMAD2Q15796 467 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 CFAP221Q4G0U5 840 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 SCN4BQ8IWT1 228 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 ZNF512Q96ME7 567 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 NECTIN4Q96NY8 510 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 UHRF1Q96T88 793 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 MED10Q9BTT4 135 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 B3GNT5Q9BYG0 378 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 ELOVL4Q9GZR5 314 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 PCDHB4Q9Y5E5 795 aa17.27■□□□□ 0.36
CHMP1A-209ENST00000550872 CLDN5O00501 218 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 POU2F2P09086 479 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 BMP1P13497 986 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 BDNFP23560 247 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 RPL10AP62906 217 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 APBA1Q02410 837 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 KCNMA1Q12791 1236 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 IQCEQ6IPM2 695 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 GJB7Q6PEY0 223 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 GRASPQ7Z6J2 395 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 UBR7Q8N806 425 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 HEXIM2Q96MH2 286 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 POMKQ9H5K3 350 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 FAM49BQ9NUQ9 324 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 CEP72Q9P209 647 aa17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 DNMT3BQ9UBC3 853 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-209ENST00000550872 ATP8B3O60423 1300 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 LGALS16A8MUM7 142 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 CCDC130P13994 396 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 PTPN2P17706 415 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 GRIK1P39086 918 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 MAGEA11P43364 429 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 GPR15P49685 360 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 RAD23BP54727 409 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 MFAP3P55082 362 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 VEPH1Q14D04 833 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 TAF12Q16514 161 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 DDR2Q16832 855 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 SDHAF4Q5VUM1 108 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 TMEM270Q6UE05 265 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 VSTM1Q6UX27 236 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 C12orf29Q8N999 325 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 SLC4A11Q8NBS3 891 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 GIPC2Q8TF65 315 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 TMEM176AQ96HP8 235 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 FAM81BQ96LP2 452 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 KREMEN1Q96MU8 473 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 CORO1BQ9BR76 489 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 LSM14BQ9BX40 385 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 ZNF518BQ9C0D4 1074 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 WDR6Q9NNW5 1121 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 SIX2Q9NPC8 291 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 HCFC1R1Q9NWW0 138 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 APEX2Q9UBZ4 518 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 ASB3Q9Y575 518 aa17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 TCF20Q9UGU0 1960 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-209ENST00000550872 C2orf16Q68DN1 1984 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 ATF6P18850 670 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 ACO1P21399 889 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 ADORA2BP29275 332 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 ZNF445P59923 1031 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 NTHL1P78549 312 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 UBXN1Q04323 297 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 ARHGAP44Q17R89 818 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 FILIP1LQ4L180 1135 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 ENOSF1Q7L5Y1 443 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 APTXQ7Z2E3 356 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 DNAJB7Q7Z6W7 309 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 ITIH5Q86UX2 942 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 FAM35AQ86V20 835 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 FUKQ8N0W3 1084 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 SLC2A14Q8TDB8 520 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 GPR152Q8TDT2 470 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 JAKMIP2Q96AA8 810 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 CYFIP2Q96F07 1278 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 PHF7Q9BWX1 381 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 DNAJC12Q9UKB3 198 aa17.24■□□□□ 0.35
CHMP1A-209ENST00000550872 CLUHO75153 1309 aa17.23■□□□□ 0.35
CHMP1A-209ENST00000550872 SERPINC1P01008 464 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms