RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 UHRF1Q96T88 793 aaPredicted RBP14.36□□□□□ -0.11
ERBB3-215ENST00000550828 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 ZNF518BQ9C0D4 1074 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.36□□□□□ -0.11
ERBB3-215ENST00000550828 NOCTQ9UK39 431 aaKnown RBP14.36□□□□□ -0.11
ERBB3-215ENST00000550828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.36□□□□□ -0.11
ERBB3-215ENST00000550828 MTCH2Q9Y6C9 303 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 NCOR1O75376 2440 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 O00370 1275 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 MFAP3LO75121 409 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 ABLIM3O94929 683 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 SEC24AO95486 1093 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 PAEPP09466 180 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 CPB1P15086 417 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 EPCAMP16422 314 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 CHRNB2P17787 502 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 KRT9P35527 623 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 STAT1P42224 750 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 ZBED6P86452 979 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 TSPY1Q01534 308 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 HYAL1Q12794 435 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 DUSP6Q16828 381 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 TCEAL5Q5H9L2 206 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 PPP1R26Q5T8A7 1209 aaPredicted RBP14.35□□□□□ -0.11
ERBB3-215ENST00000550828 PALB2Q86YC2 1186 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 TC2NQ8N9U0 490 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 SPC24Q8NBT2 197 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 TNIP3Q96KP6 325 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 SPAG5Q96R06 1193 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 AIPL1Q9NZN9 384 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 SSX2IPQ9Y2D8 614 aa14.35□□□□□ -0.11
ERBB3-215ENST00000550828 ARIH1Q9Y4X5 557 aaPredicted RBP14.35□□□□□ -0.11
ERBB3-215ENST00000550828 PRUNE2Q8WUY3 3088 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 TGM5O43548 720 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 SOAT2O75908 522 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 GLP2RO95838 553 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 SPATA31D3P0C874 917 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 CD19P15391 556 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 CYP11B1P15538 503 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 POU3F3P20264 500 aaPredicted RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 GNA15P30679 374 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 NRIP1P48552 1158 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 CLCN4P51793 760 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 ADKP55263 362 aaKnown RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 CREMQ03060 361 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 ARID5AQ03989 594 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 KCNC3Q14003 757 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 TRIM14Q14142 442 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 HGSNATQ68CP4 663 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 ARHGAP17Q68EM7 881 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 SPATA31D4Q6ZUB0 917 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 RBM23Q86U06 439 aaKnown RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 FAM35AQ86V20 835 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 TTC30AQ86WT1 665 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 SLC2A14Q8TDB8 520 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 PPM1EQ8WY54 764 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 HEXIM2Q96MH2 286 aaKnown RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 DNAJC7Q99615 494 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 HNRNPABQ99729 332 aaKnown RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 EMILIN2Q9BXX0 1053 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 OXCT2Q9BYC2 517 aaPredicted RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 ABI2Q9NYB9 513 aaPredicted RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 RAPGEFL1Q9UHV5 662 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 FBXW11Q9UKB1 542 aa14.34□□□□□ -0.11
ERBB3-215ENST00000550828 LUC7L2Q9Y383 392 aaKnown RBP14.34□□□□□ -0.11
ERBB3-215ENST00000550828 LINC01565O15544 149 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 BEST1O76090 585 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 MICAL2O94851 1124 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 ADH1AP07327 375 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 PLEKP08567 350 aaPredicted RBP14.33□□□□□ -0.12
ERBB3-215ENST00000550828 VDRP11473 427 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 SKILP12757 684 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 BDNFP23560 247 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 CYP2F1P24903 491 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 KLRC2P26717 231 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 ADORA2BP29275 332 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
ERBB3-215ENST00000550828 HNRNPH3P31942 346 aaKnown RBP14.33□□□□□ -0.12
ERBB3-215ENST00000550828 GPR15P49685 360 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 ADCY1Q08828 1119 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 DUSP4Q13115 394 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 ASIC2Q16515 512 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 PTPROQ16827 1216 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 GOLGA7BQ2TAP0 167 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 PKDCCQ504Y2 493 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 SMYD5Q6GMV2 418 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 DENND1BQ6P3S1 775 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 PPFIBP1Q86W92 1011 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 DCP1BQ8IZD4 617 aaKnown RBP14.33□□□□□ -0.12
ERBB3-215ENST00000550828 STKLD1Q8NE28 680 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 ZMIZ2Q8NF64 920 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 ZNF461Q8TAF7 563 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 IQCDQ96DY2 449 aa14.33□□□□□ -0.12
ERBB3-215ENST00000550828 CYFIP2Q96F07 1278 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms