RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 TRMT2BQ96GJ1 504 aaKnown RBP11.66□□□□□ -0.54
PFDN5-210ENST00000550513 FAM84AQ96KN4 292 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 FAM83CQ9BQN1 747 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 FGFBP2Q9BYJ0 223 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 TRPC7Q9HCX4 862 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 PCDHB13Q9Y5F0 798 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 SNX9Q9Y5X1 595 aa11.66□□□□□ -0.54
PFDN5-210ENST00000550513 FRMD3A2A2Y4 597 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 OTOL1A6NHN0 477 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-210ENST00000550513 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 SLC30A4O14863 429 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 EXTL3O43909 919 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 FOXD2O60548 495 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-210ENST00000550513 ATG13O75143 517 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 NOL4O94818 638 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 ARSAP15289 507 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 CYP2F1P24903 491 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 HOXA6P31267 233 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 HOXC13P31276 330 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 AMPD2Q01433 879 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 USP4Q13107 963 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-210ENST00000550513 MTF1Q14872 753 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 PDGFRLQ15198 375 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 DDR2Q16832 855 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 CCDC142Q17RM4 750 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 MON1AQ86VX9 555 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 OSTM1Q86WC4 334 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 SPATA2LQ8IUW3 424 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-210ENST00000550513 GPD1LQ8N335 351 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 CPA6Q8N4T0 437 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 CSGALNACT2Q8N6G5 542 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 TOP6BLQ8N6T0 577 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 TTC16Q8NEE8 873 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 RIN3Q8TB24 985 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 SPATA18Q8TC71 538 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 EXOC4Q96A65 974 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 CHFRQ96EP1 664 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 ANKRD36BP1Q96IX9 119 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 PKMYT1Q99640 499 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 CBWD1Q9BRT8 395 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 PCIF1Q9H4Z3 704 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 TMEM206Q9H813 350 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 PDE11AQ9HCR9 933 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 PANK4Q9NVE7 773 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 GTF3C4Q9UKN8 822 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 SLC8A2Q9UPR5 921 aa11.65□□□□□ -0.54
PFDN5-210ENST00000550513 R3HCC1Q9Y3T6 440 aaKnown RBP11.65□□□□□ -0.54
PFDN5-210ENST00000550513 A0A087X0B3 334 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 TRAV19A0A0A6YYK7 116 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 TRDMT1O14717 391 aaKnown RBP11.64□□□□□ -0.55
PFDN5-210ENST00000550513 HCRTO43612 131 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 RNF40O75150 1001 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 RPP40O75818 363 aaKnown RBP11.64□□□□□ -0.55
PFDN5-210ENST00000550513 EGFP01133 1207 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 CKMP06732 381 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 USP17L7P0C7H9 530 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 PCSK1P29120 753 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 IFNAR2P48551 515 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 LHX1P48742 406 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 PXNP49023 591 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-210ENST00000550513 FAM160A1Q05DH4 1040 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 ZNF77Q15935 545 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 CFAP221Q4G0U5 840 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 LMBRD2Q68DH5 695 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-210ENST00000550513 STXBP4Q6ZWJ1 553 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 FSIP1Q8NA03 581 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 CXorf38Q8TB03 319 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 GAB3Q8WWW8 586 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 FUBP3Q96I24 572 aaKnown RBP eCLIP11.64□□□□□ -0.55
PFDN5-210ENST00000550513 MYRFLQ96LU7 910 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 CNTNAP3BQ96NU0 1288 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 CNTNAP3Q9BZ76 1288 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 GDAP2Q9NXN4 497 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 SIX4Q9UIU6 781 aa11.64□□□□□ -0.55
PFDN5-210ENST00000550513 LAMA1P25391 3075 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 PTPRJQ12913 1337 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 CCDC163A0A0D9SF12 145 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
PFDN5-210ENST00000550513 GDF9O60383 454 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 PRPF6O94906 941 aaKnown RBP11.63□□□□□ -0.55
PFDN5-210ENST00000550513 EPN2O95208 641 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 TNNC2P02585 160 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 ADRB1P08588 477 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 SYT1P21579 422 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 DRD1P21728 446 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 GJA4P35212 333 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 PSMC1P62191 440 aaKnown RBP11.63□□□□□ -0.55
PFDN5-210ENST00000550513 RBP5P82980 135 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 MYO1EQ12965 1108 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 KCNB1Q14721 858 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
PFDN5-210ENST00000550513 SCARA3Q6AZY7 606 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 C4orf50Q6ZRC1 276 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 CACNA2D4Q7Z3S7 1137 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 SCN4BQ8IWT1 228 aa11.63□□□□□ -0.55
PFDN5-210ENST00000550513 CCDC65Q8IXS2 484 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms