RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 C2orf15Q8WU43 125 aaKnown RBP13.87□□□□□ -0.19
RAB5C-206ENST00000550406 HDAC7Q8WUI4 952 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 BAP1Q92560 729 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 PABPC5Q96DU9 382 aaKnown RBP13.87□□□□□ -0.19
RAB5C-206ENST00000550406 CYFIP2Q96F07 1278 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 HEXIM2Q96MH2 286 aaKnown RBP13.87□□□□□ -0.19
RAB5C-206ENST00000550406 HNRNPABQ99729 332 aaKnown RBP13.87□□□□□ -0.19
RAB5C-206ENST00000550406 ZNF518BQ9C0D4 1074 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 PLEKHA4Q9H4M7 779 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 CYP4F11Q9HBI6 524 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 FAM49BQ9NUQ9 324 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 CLDND1Q9NY35 253 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 ABI2Q9NYB9 513 aaPredicted RBP13.87□□□□□ -0.19
RAB5C-206ENST00000550406 MAFFQ9ULX9 164 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 OBSL1O75147 1896 aa13.87□□□□□ -0.19
RAB5C-206ENST00000550406 BRWD1Q9NSI6 2320 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 F8VZ95 297 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 CYP26A1O43174 497 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 CBFA2T2O43439 604 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 NCK2O43639 380 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 ZMYND10O75800 440 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 BEST1O76090 585 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 C8AP07357 584 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 PAEPP09466 180 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 KRT5P13647 590 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 RFX1P22670 979 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 GPR15P49685 360 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 CYP27A1Q02318 531 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 SMARCB1Q12824 385 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 MAPRE1Q15691 268 aaKnown RBP13.86□□□□□ -0.19
RAB5C-206ENST00000550406 CFAP221Q4G0U5 840 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 ARHGAP17Q68EM7 881 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 SMYD5Q6GMV2 418 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 SPATA2LQ8IUW3 424 aaPredicted RBP13.86□□□□□ -0.19
RAB5C-206ENST00000550406 VSTM4Q8IW00 320 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 SLC7A14Q8TBB6 771 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 SLC2A14Q8TDB8 520 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 CASP10Q92851 521 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 ZNF707Q96C28 371 aaPredicted RBP13.86□□□□□ -0.19
RAB5C-206ENST00000550406 FUBP3Q96I24 572 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■■□□ 14.6
RAB5C-206ENST00000550406 MSLNLQ96KJ4 702 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 TRIM5Q9C035 493 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 S1PR5Q9H228 398 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 ABCB6Q9NP58 842 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 HSFX1Q9UBD0 423 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 DAAM1Q9Y4D1 1078 aa13.86□□□□□ -0.19
RAB5C-206ENST00000550406 CFHP08603 1231 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 VDRP11473 427 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 ATF6P18850 670 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 BRD2P25440 801 aaKnown RBP13.85□□□□□ -0.19
RAB5C-206ENST00000550406 ELF1P32519 619 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 USP8P40818 1118 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 MAGEA11P43364 429 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 ZNF75DP51815 510 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 SDHAF4Q5VUM1 108 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 C4orf50Q6ZRC1 276 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 FAM35AQ86V20 835 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 ZMIZ2Q8NF64 920 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
RAB5C-206ENST00000550406 SMOQ99835 787 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 APOL5Q9BWW9 433 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 PRDM6Q9NQX0 595 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 KIAA1257Q9ULG3 409 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 YIPF1Q9Y548 306 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 INSL5Q9Y5Q6 135 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 ANAPC1Q9H1A4 1944 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 ITIH6Q6UXX5 1313 aa13.85□□□□□ -0.19
RAB5C-206ENST00000550406 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 O00370 1275 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 PRRG1O14668 218 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 GFPT2O94808 682 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 CD19P15391 556 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 ADORA2BP29275 332 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 SSTR3P32745 418 aaPredicted RBP13.84□□□□□ -0.19
RAB5C-206ENST00000550406 SOX5P35711 763 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 TWF1Q12792 350 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 DDR2Q16832 855 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 MGAT5BQ3V5L5 792 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 PKDCCQ504Y2 493 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 SGO2Q562F6 1265 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 PPM1LQ5SGD2 360 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
RAB5C-206ENST00000550406 E4F1Q66K89 784 aaPredicted RBP13.84□□□□□ -0.19
RAB5C-206ENST00000550406 CCDC149Q6ZUS6 474 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 RTL10Q7L3V2 364 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 SLC47A2Q86VL8 602 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 TTC30AQ86WT1 665 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 STKLD1Q8NE28 680 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 GPR152Q8TDT2 470 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 ZNF606Q8WXB4 792 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 SEPT5Q99719 369 aaPredicted RBP13.84□□□□□ -0.19
RAB5C-206ENST00000550406 MED10Q9BTT4 135 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 EDEM3Q9BZQ6 932 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms