RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 NUDCD3Q8IVD9 361 aa12.68□□□□□ -0.38
VDR-208ENST00000550325 PLEKHO2Q8TD55 490 aa12.68□□□□□ -0.38
VDR-208ENST00000550325 POMGNT1Q8WZA1 660 aa12.68□□□□□ -0.38
VDR-208ENST00000550325 DGCR14Q96DF8 476 aaKnown RBP12.68□□□□□ -0.38
VDR-208ENST00000550325 CATSPER2Q96P56 530 aa12.68□□□□□ -0.38
VDR-208ENST00000550325 PRPF18Q99633 342 aaKnown RBP12.68□□□□□ -0.38
VDR-208ENST00000550325 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
VDR-208ENST00000550325 AMNQ9BXJ7 453 aa12.68□□□□□ -0.38
VDR-208ENST00000550325 S100A14Q9HCY8 104 aa12.68□□□□□ -0.38
VDR-208ENST00000550325 COL5A2P05997 1499 aaPredicted RBP12.67□□□□□ -0.38
VDR-208ENST00000550325 IQANK1A0A1B0GTG1 560 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 RIMBP2O15034 1052 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 TM9SF1O15321 606 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 LIASO43766 372 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 ADCY3O60266 1144 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 MTA2O94776 668 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PENKP01210 267 aaPredicted RBP12.67□□□□□ -0.38
VDR-208ENST00000550325 RGS2P41220 211 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 BST1Q10588 318 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 CBX3Q13185 183 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 BMPR2Q13873 1038 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 KLC3Q6P597 504 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 DCUN1D2Q6PH85 259 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 MRPL1Q9BYD6 325 aaKnown RBP12.67□□□□□ -0.38
VDR-208ENST00000550325 WWP1Q9H0M0 922 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 ADAMTS6Q9UKP5 1117 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 ZNF232Q9UNY5 417 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 TMEM150BA6NC51 233 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PROCP04070 461 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 NRLP54845 237 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PEX3P56589 373 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 KRT72Q14CN4 511 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 CNGA3Q16281 694 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 SMTNL2Q2TAL5 461 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 KLHL38Q2WGJ6 581 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 KCTD21Q4G0X4 260 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 KLHDC10Q6PID8 442 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 EBF4Q9BQW3 602 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 LXNQ9BS40 222 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
VDR-208ENST00000550325 ALOX15BO15296 676 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 MAGEC1O60732 1142 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PROSCO94903 275 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 CACNB3P54284 484 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PDE1CQ14123 709 aaPredicted RBP12.67□□□□□ -0.38
VDR-208ENST00000550325 SLC44A4Q53GD3 710 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PTF1AQ7RTS3 328 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PDSS2Q86YH6 399 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 PDIK1LQ8N165 341 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 BANPQ8N9N5 519 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 E2F7Q96AV8 911 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 ACCSQ96QU6 501 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 BTBD7Q9P203 1132 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 LZTS1Q9Y250 596 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 DTNAQ9Y4J8 743 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 UBR2Q8IWV8 1755 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 ALS2Q96Q42 1657 aa12.67□□□□□ -0.38
VDR-208ENST00000550325 TRPM3Q9HCF6 1732 aaPredicted RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 TRIM49D1C9J1S8 452 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 F8W8V4 182 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 ADRB2P07550 413 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 RXRBP28702 533 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 NADK2Q4G0N4 442 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 CLEC4GQ6UXB4 293 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 TSHZ1Q6ZSZ6 1077 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 TDRPQ86YL5 185 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 GLT8D2Q9H1C3 349 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 GPRC5CQ9NQ84 441 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 ANLNQ9NQW6 1124 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 DMAC2Q9NW81 257 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 PAIP2BQ9ULR5 123 aaKnown RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 HEMK1Q9Y5R4 338 aaPredicted RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 BCL9O00512 1426 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 CLUHO75153 1309 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 RAP1GDS1P52306 607 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 GTF2IP78347 998 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 KRT39Q6A163 491 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 FAM172AQ8WUF8 416 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 SRPK1Q96SB4 655 aaKnown RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 LIN28AQ9H9Z2 209 aaKnown RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 ARHGEF4Q9NR80 690 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 STK32BQ9NY57 414 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 VAV3Q9UKW4 847 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 INPP5FQ9Y2H2 1132 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 SMIM31A0A1B0GVY4 71 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 DENND3A2RUS2 1198 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 FKBP6O75344 327 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 NELFEP18615 380 aaKnown RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 MSX2P35548 267 aaPredicted RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 NCKAP1LP55160 1127 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 PRKD1Q15139 912 aaPredicted RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 KBTBD12Q3ZCT8 623 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 HSP90AA5PQ58FG0 334 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms