RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 MC3RP41968 323 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 AFMP43652 599 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 LIN54Q6MZP7 749 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 STK32CQ86UX6 486 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 PLXDC1Q8IUK5 500 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 TMTC1Q8IUR5 882 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 GLIS1Q8NBF1 620 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 IPO4Q8TEX9 1081 aaKnown RBP7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 STYXQ8WUJ0 223 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 ASB12Q8WXK4 309 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 ZSWIM3Q96MP5 696 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 FAM167BQ9BTA0 163 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 NECTIN3Q9NQS3 549 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 VPS45Q9NRW7 570 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 ING3Q9NXR8 418 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 IFT80Q9P2H3 777 aaPredicted RBP7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 SBF1O95248 1867 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 TJP1Q07157 1748 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 IRS2Q9Y4H2 1338 aa7.09□□□□□ -1.27
TGFBR1-208ENST00000550253 ATRNL1Q5VV63 1379 aa7.09□□□□□ -1.28
TGFBR1-208ENST00000550253 C10orf71Q711Q0 1435 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 TISP43B9A030 160 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 B9A039 149 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 PYCARD-AS1I3L0S3 204 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 CD4P01730 458 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 CHGBP05060 677 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 SBK3P0C264 359 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 GABRB3P28472 473 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 KCNJ5P48544 419 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 CARSP49589 748 aaKnown RBP7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 RASSF7Q02833 373 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 CREMQ03060 361 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 HABP2Q14520 560 aaPredicted RBP7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 PLCL1Q15111 1095 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 CCDC93Q567U6 631 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 FBXO47Q5MNV8 452 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 RRAGBQ5VZM2 374 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 TRIM68Q6AZZ1 485 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 FAM180BQ6P0A1 224 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 FBXO38Q6PIJ6 1188 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 ZNF572Q7Z3I7 529 aaPredicted RBP7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 MOGAT3Q86VF5 341 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 SDR16C5Q8N3Y7 309 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 SIMC1Q8NDZ2 872 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 GFM2Q969S9 779 aaKnown RBP7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 NELL2Q99435 816 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 OSBPL5Q9H0X9 879 aaPredicted RBP7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 UNC45AQ9H3U1 944 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 TMEM8AQ9HCN3 771 aa7.08□□□□□ -1.28
TGFBR1-208ENST00000550253 A0A0G2JLW4 131 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 POLBP06746 335 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 ITGA5P08648 1049 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 MMP10P09238 476 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 SPINK2P20155 84 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 CAPN3P20807 821 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 KCNA3P22001 575 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 PHKA1P46020 1223 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 GSK3AP49840 483 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 SP140Q13342 867 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 RAB32Q13637 225 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 KIF22Q14807 665 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 MZT2BQ6NZ67 158 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 BORAQ6PGQ7 559 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 IL17RDQ8NFM7 739 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 SMARCC2Q8TAQ2 1214 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 ZNF384Q8TF68 577 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 EID2BQ96D98 161 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 LRRC46Q96FV0 321 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 GORASP1Q9BQQ3 440 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 SLC26A6Q9BXS9 759 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 C11orf54Q9H0W9 315 aaPredicted RBP7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 SLC6A17Q9H1V8 727 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 PCDH18Q9HCL0 1135 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 WASH6PQ9NQA3 447 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 SPATA6Q9NWH7 488 aaPredicted RBP7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 SCAF8Q9UPN6 1271 aaKnown RBP7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 RUVBL1Q9Y265 456 aaKnown RBP7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 TMEM98Q9Y2Y6 226 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 PAXBP1Q9Y5B6 917 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 ITIH6Q6UXX5 1313 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 KCPQ6ZWJ8 1503 aa7.07□□□□□ -1.28
TGFBR1-208ENST00000550253 A0A087WZ62 844 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 C2orf78A6NCI8 922 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 MBD3L4A6NDZ8 208 aaPredicted RBP7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 MBD3L3A6NE82 208 aaPredicted RBP7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 GRM6O15303 877 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 ATF2P15336 505 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 ALOX15P16050 662 aaPredicted RBP7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 CNTFP26441 200 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 VIPR1P32241 457 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 PTPN7P35236 360 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 KIR2DL3P43628 341 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 ALDH1A3P47895 512 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 KCNQ1P51787 676 aa7.06□□□□□ -1.28
TGFBR1-208ENST00000550253 TOP3AQ13472 1001 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms