RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
CACNB3-214ENST00000550168 TWNKQ96RR1 684 aa13.3□□□□□ -0.28
CACNB3-214ENST00000550168 ZSWIM1Q9BR11 485 aa13.3□□□□□ -0.28
CACNB3-214ENST00000550168 MRPL45Q9BRJ2 306 aaKnown RBP13.3□□□□□ -0.28
CACNB3-214ENST00000550168 TSPAN16Q9UKR8 245 aa13.3□□□□□ -0.28
CACNB3-214ENST00000550168 L1RE1Q9UN81 338 aa13.3□□□□□ -0.28
CACNB3-214ENST00000550168 TARSL2A2RTX5 802 aaKnown RBP13.29□□□□□ -0.28
CACNB3-214ENST00000550168 CARNS1A5YM72 827 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 PPEF2O14830 753 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 PSTPIP1O43586 416 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 NCK2O43639 380 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 CXCL10P02778 98 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 TYMPP19971 482 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 CETN2P41208 172 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
CACNB3-214ENST00000550168 PDCLQ13371 301 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 PIGHQ14442 188 aaPredicted RBP13.29□□□□□ -0.28
CACNB3-214ENST00000550168 MBTPS1Q14703 1052 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 TEX35Q5T0J7 233 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 SEL1L2Q5TEA6 688 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 LRRC38Q5VT99 294 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 DENND1BQ6P3S1 775 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 DSTYKQ6XUX3 929 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 PDCL2Q8N4E4 241 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 MMGT1Q8N4V1 131 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 NIPA2Q8N8Q9 360 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 KBTBD7Q8WVZ9 684 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 MAIP1Q8WWC4 291 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
CACNB3-214ENST00000550168 MRPL9Q9BYD2 267 aaKnown RBP13.29□□□□□ -0.28
CACNB3-214ENST00000550168 CXCL16Q9H2A7 254 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 HIPK3Q9H422 1215 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 PCDHA3Q9Y5H8 950 aa13.29□□□□□ -0.28
CACNB3-214ENST00000550168 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 TCRBV5S1A1TA0A578 114 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 TMEM191CA6NGB0 347 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 SIGLEC16A6NMB1 481 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 SPTLC1O15269 473 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
CACNB3-214ENST00000550168 TRAPPC3O43617 180 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 SRGAP2O75044 1071 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 CYP11A1P05108 521 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 COMTP21964 271 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 GJA8P48165 433 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 RWDD2BP57060 319 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 MAPRE1Q15691 268 aaKnown RBP13.28□□□□□ -0.28
CACNB3-214ENST00000550168 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 PKDCCQ504Y2 493 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 NOMO2Q5JPE7 1267 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 MTERF4Q7Z6M4 381 aaKnown RBP13.28□□□□□ -0.28
CACNB3-214ENST00000550168 DNAAF5Q86Y56 855 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 ABI1Q8IZP0 508 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 WDTC1Q8N5D0 677 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 RNF169Q8NCN4 708 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 B3GALNT2Q8NCR0 500 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 SPATA4Q8NEY3 305 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 COG1Q8WTW3 980 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 CD101Q93033 1021 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 LPPQ93052 612 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 HSFY1Q96LI6 401 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 RUNDC3BQ96NL0 473 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
CACNB3-214ENST00000550168 UBE2OQ9C0C9 1292 aaKnown RBP13.28□□□□□ -0.28
CACNB3-214ENST00000550168 GOLGA2P5Q9HBQ8 144 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 HMGXB4Q9UGU5 601 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
CACNB3-214ENST00000550168 M0QZQ0 153 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 DDX3YO15523 660 aaKnown RBP13.27□□□□□ -0.29
CACNB3-214ENST00000550168 CEP104O60308 925 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
CACNB3-214ENST00000550168 NBNO60934 754 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 CALCAP01258 141 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 CFHP08603 1231 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 KRT3P12035 628 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 CLCNKBP51801 687 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 PSMC1P62191 440 aaKnown RBP13.27□□□□□ -0.29
CACNB3-214ENST00000550168 DSC1Q08554 894 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 ERCC6LQ2NKX8 1250 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 PTPN20Q4JDL3 420 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 TMEM31Q5JXX7 168 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 ARCQ7LC44 396 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 ACOT1Q86TX2 421 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 RHOT1Q8IXI2 618 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 MYLIPQ8WY64 445 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 ANKRD7Q92527 254 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.29
CACNB3-214ENST00000550168 SLC4A5Q9BY07 1137 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 PCDHB7Q9Y5E2 793 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 UNC79Q9P2D8 2635 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 CDH23Q9H251 3354 aa13.27□□□□□ -0.29
CACNB3-214ENST00000550168 MEIS3P2A8K0S8 358 aa13.26□□□□□ -0.29
CACNB3-214ENST00000550168 XPO1O14980 1071 aaKnown RBP13.26□□□□□ -0.29
CACNB3-214ENST00000550168 ZNF185O15231 689 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms