RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 CRY1Q16526 586 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 EML3Q32P44 896 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 SPATA1Q5VX52 437 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 SLC23A3Q6PIS1 610 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 C1orf186Q6ZWK4 172 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 EFCAB13Q8IY85 973 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 TMEM161BQ8NDZ6 487 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 OLIG1Q8TAK6 271 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 SNX29Q8TEQ0 813 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 BICD1Q96G01 975 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 SLC22A12Q96S37 553 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 LINC00597Q9H2U6 94 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 TRPC7Q9HCX4 862 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 DSEQ9UL01 958 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 MMP17Q9ULZ9 603 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 PKD1L2Q7Z442 2459 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 SPAG17Q6Q759 2223 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 UPK3BL1B0FP48 263 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 UPK3BL2E5RIL1 263 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PIRO00625 290 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 CYB561D2O14569 222 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 JAK2O60674 1132 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PRPF40AO75400 957 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 ALDH1A2O94788 518 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 CYP11A1P05108 521 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 CKMP06732 381 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PLS3P13797 630 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 HNRNPLP14866 589 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PAX3P23760 479 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 P2RY2P41231 377 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 SMARCB1Q12824 385 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PDIA5Q14554 519 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 SAFBQ15424 915 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 ZNF77Q15935 545 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 ME3Q16798 604 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 SDHAF4Q5VUM1 108 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 C9orf57Q5W0N0 161 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 LYSMD4Q5XG99 296 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 JADE1Q6IE81 842 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 RAB44Q7Z6P3 723 aaPredicted RBP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 HNRNPLLQ8WVV9 542 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 SPACA7Q96KW9 195 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PYM1Q9BRP8 204 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PI4K2AQ9BTU6 479 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 RPF1Q9H9Y2 349 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 BCCIPQ9P287 314 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PILRBQ9UKJ0 227 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 SLC6A14Q9UN76 642 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 PCDHB5Q9Y5E4 795 aa11.66□□□□□ -0.54
TRAFD1-206ENST00000549358 TRAV19A0A0A6YYK7 116 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 USP17L7P0C7H9 530 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 CSH1P0DML2 217 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 CSH2P0DML3 217 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 ITPKAP23677 461 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 CDC25AP30304 524 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 OPRD1P41143 372 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 NBR1Q14596 966 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 DDR2Q16832 855 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 ZNF423Q2M1K9 1284 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 TTC38Q5R3I4 469 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 WSCD1Q658N2 575 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 DCP1BQ8IZD4 617 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 PGBD3Q8N328 593 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 DEFB119Q8N690 84 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 ALLCQ8N6M5 410 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 C4orf32Q8N8J7 132 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 WHAMMQ8TF30 809 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 GTF3C6Q969F1 213 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 BBC3Q96PG8 261 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 TSPAN18Q96SJ8 248 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 TMLHEQ9NVH6 421 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 STK24Q9Y6E0 443 aa11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 SMG1Q96Q15 3661 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-206ENST00000549358 GCN1Q92616 2671 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 FASNP49327 2511 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 ADAMTS20P59510 1910 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 ANO9A1A5B4 782 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 EIF4E1BA6NMX2 242 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 FAM189A1O60320 539 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 OPHN1O60890 802 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 ADRB2P07550 413 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 NFICP08651 508 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 GUCY2CP25092 1073 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 DPP6P42658 865 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 LIG4P49917 911 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 MRPS21P82921 87 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 KYAT1Q16773 422 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 DUOXA1Q1HG43 343 aa11.64□□□□□ -0.55
TRAFD1-206ENST00000549358 ZC2HC1CQ53FD0 456 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms