RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ROPN1Q9HAT0 212 aaPredicted RBP14.85□□□□□ -0.03
CACNB3-209ENST00000548860 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 SOX11P35716 441 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 AP1B1Q10567 949 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 CCNG2Q16589 344 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 SH3PXD2AQ5TCZ1 1133 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 ATF7IP2Q5U623 682 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 CCDC125Q86Z20 511 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 ZC3H7BQ9UGR2 993 aaKnown RBP14.85□□□□□ -0.03
CACNB3-209ENST00000548860 SMIM24O75264 130 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 NUDT17P0C025 328 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 FOXN2P32314 431 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 TFDP3Q5H9I0 405 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 THTPAQ9BU02 230 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 KIAA1683Q9H0B3 1180 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 KDM4CQ9H3R0 1056 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 IFT122Q9HBG6 1241 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 SLC17A7Q9P2U7 560 aa14.85□□□□□ -0.03
CACNB3-209ENST00000548860 PSMC3IPQ9P2W1 217 aaPredicted RBP14.85□□□□□ -0.03
CACNB3-209ENST00000548860 CLGNO14967 610 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 ATP9BO43861 1147 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 NOMO3P69849 1222 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 NUDCD3Q8IVD9 361 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 SCYL1Q96KG9 808 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 FSCN2O14926 492 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 SLC20A2Q08357 652 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 FAM47CQ5HY64 1035 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 C16orf46Q6P387 395 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 RAPH1Q70E73 1250 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 SLC9A9Q8IVB4 645 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 MAP7D3Q8IWC1 876 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 UNC45BQ8IWX7 931 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 TTC8Q8TAM2 541 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 SEPT1Q8WYJ6 367 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 TLCD1Q96CP7 247 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 USH1CQ9Y6N9 552 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 NEMP1O14524 444 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 OPHN1O60890 802 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 GDF10P55107 478 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 NCALDP61601 193 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 CAV1Q03135 178 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 ZACNQ401N2 412 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 LGSNQ5TDP6 509 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 ATXN2LQ8WWM7 1075 aaKnown RBP14.84□□□□□ -0.03
CACNB3-209ENST00000548860 MPHOSPH6Q99547 160 aaKnown RBP14.84□□□□□ -0.03
CACNB3-209ENST00000548860 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.84□□□□□ -0.03
CACNB3-209ENST00000548860 ZNF536O15090 1300 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 ZNF541Q9H0D2 1346 aa14.84□□□□□ -0.03
CACNB3-209ENST00000548860 TIAM2Q8IVF5 1701 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 A0A087WZ62 844 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 SLC4A1P02730 911 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 SDC4P31431 198 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 SP2Q02086 613 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 FAAP100Q0VG06 881 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 TMEM192Q8IY95 271 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 NDUFAF2Q8N183 169 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 POU5F2Q8N7G0 328 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 GBP7Q8N8V2 638 aaPredicted RBP14.83□□□□□ -0.03
CACNB3-209ENST00000548860 TMC2Q8TDI7 906 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 TFAP2BQ92481 460 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 FDXACB1Q9BRP7 624 aaPredicted RBP14.83□□□□□ -0.03
CACNB3-209ENST00000548860 ASCC2Q9H1I8 757 aaPredicted RBP14.83□□□□□ -0.03
CACNB3-209ENST00000548860 LRRC19Q9H756 370 aa14.83□□□□□ -0.03
CACNB3-209ENST00000548860 GOLGA4Q13439 2230 aaKnown RBP14.83□□□□□ -0.04
CACNB3-209ENST00000548860 KBTBD13C9JR72 458 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 USP12O75317 370 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 SERPINB3P29508 390 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 GEN1Q17RS7 908 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 KIZQ2M2Z5 673 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 CATSPER4Q7RTX7 472 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 ECHDC2Q86YB7 292 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 CLMNQ96JQ2 1002 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 LPIN3Q9BQK8 851 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 IQANK1A0A1B0GTG1 560 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 A8MXQ7 604 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 B2RBV5 119 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 DCTN3O75935 186 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 KRT7P08729 469 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 HSDL1Q3SXM5 330 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 KBTBD12Q3ZCT8 623 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 VSTM1Q6UX27 236 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 DPP9Q86TI2 863 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 USP33Q8TEY7 942 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 MANSC1Q9H8J5 431 aa14.83□□□□□ -0.04
CACNB3-209ENST00000548860 COL16A1Q07092 1604 aaPredicted RBP14.83□□□□□ -0.04
CACNB3-209ENST00000548860 PTGER2P43116 358 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 LAMTOR4Q0VGL1 99 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 CAPSQ13938 189 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 SUGP1Q8IWZ8 645 aaKnown RBP14.82□□□□□ -0.04
CACNB3-209ENST00000548860 SMC1BQ8NDV3 1235 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 PPP4R1Q8TF05 950 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 CKAP2Q8WWK9 683 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 RXFP2Q8WXD0 754 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 CRYGNQ8WXF5 182 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 DDX27Q96GQ7 796 aaKnown RBP14.82□□□□□ -0.04
CACNB3-209ENST00000548860 ZNF395Q9H8N7 513 aaPredicted RBP14.82□□□□□ -0.04
CACNB3-209ENST00000548860 DNALI1O14645 258 aaPredicted RBP14.82□□□□□ -0.04
CACNB3-209ENST00000548860 ASAP2O43150 1006 aa14.82□□□□□ -0.04
CACNB3-209ENST00000548860 MED7O43513 233 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms