RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 LILRA4P59901 499 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 SRSF7Q16629 238 aaKnown RBP eCLIP5.14□□□□□ -1.59
CCDC38-206ENST00000548771 TMEM119Q4V9L6 283 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 MTX3Q5HYI7 312 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 TREML2Q5T2D2 321 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 ZBTB46Q86UZ6 589 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 CELF5Q8N6W0 485 aaKnown RBP5.14□□□□□ -1.59
CCDC38-206ENST00000548771 C9orf106Q8NAJ2 232 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 ATG4AQ8WYN0 398 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 C1GALT1C1Q96EU7 318 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 CGRRF1Q99675 332 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 THAP7Q9BT49 309 aaPredicted RBP5.14□□□□□ -1.59
CCDC38-206ENST00000548771 FSD1LQ9BXM9 530 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 TTYH3Q9C0H2 523 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 SERTAD3Q9UJW9 196 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 NDRG4Q9ULP0 352 aaKnown RBP5.14□□□□□ -1.59
CCDC38-206ENST00000548771 PCDHA6Q9UN73 950 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 ANKRD6Q9Y2G4 727 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 EEFSECP57772 596 aaKnown RBP5.13□□□□□ -1.59
CCDC38-206ENST00000548771 TUBA4AP68366 448 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 PTPROQ16827 1216 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 AMOTQ4VCS5 1084 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 SLC29A4Q7RTT9 530 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 NEK8Q86SG6 692 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 RP9Q8TA86 221 aaKnown RBP5.13□□□□□ -1.59
CCDC38-206ENST00000548771 ZCRB1Q8TBF4 217 aaKnown RBP5.13□□□□□ -1.59
CCDC38-206ENST00000548771 MESP1Q9BRJ9 268 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 XPR1Q9UBH6 696 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 GABRQQ9UN88 632 aa5.13□□□□□ -1.59
CCDC38-206ENST00000548771 PRRT4C9JH25 899 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 CSF1RP07333 972 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 GRPP07492 148 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 SFPQP23246 707 aaKnown RBP eCLIP5.12□□□□□ -1.59
CCDC38-206ENST00000548771 KELP23276 732 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 CERS1P27544 350 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 CLCN2P51788 898 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 ARFIP2P53365 341 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 KHDC1LQ5JSQ8 128 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 CEP78Q5JTW2 689 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 ARHGAP40Q5TG30 622 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 ZNF626Q68DY1 528 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 ZNF804AQ7Z570 1209 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 FANCBQ8NB91 859 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 HOOK2Q96ED9 719 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 SH3BP4Q9P0V3 963 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 STXBP5LQ9Y2K9 1186 aa5.12□□□□□ -1.59
CCDC38-206ENST00000548771 A1L4Q6 167 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 TUBB4AP04350 444 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 THP07101 528 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 FESP07332 822 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 PF4V1P10720 104 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 EPHB2P29323 1055 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 CYP4F2P78329 520 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 ZIK1Q3SY52 487 aaPredicted RBP5.11□□□□□ -1.59
CCDC38-206ENST00000548771 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 PRAMEF17Q5VTA0 474 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 LAYNQ6UX15 382 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 B3GNT9Q6UX72 402 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 PARS2Q7L3T8 475 aaKnown RBP5.11□□□□□ -1.59
CCDC38-206ENST00000548771 GLG1Q92896 1179 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 MAP3K14Q99558 947 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 RHOBTB2Q9BYZ6 727 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 SARS2Q9NP81 518 aaKnown RBP5.11□□□□□ -1.59
CCDC38-206ENST00000548771 GABBR1Q9UBS5 961 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 IP6K2Q9UHH9 426 aa5.11□□□□□ -1.59
CCDC38-206ENST00000548771 PPP6CO00743 305 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 MPGP29372 298 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 SLC11A2P49281 568 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 UCP3P55916 312 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 WNT3P56703 355 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 RAB1AP62820 205 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 HOXA4Q00056 320 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-206ENST00000548771 E2F2Q14209 437 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 ZNF267Q14586 743 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-206ENST00000548771 MORN5Q5VZ52 161 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 RGS7BPQ6MZT1 257 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-206ENST00000548771 CATSPERGQ6ZRH7 1159 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 Q6ZWC4 215 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 CHSY1Q86X52 802 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 ZNF280BQ86YH2 543 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 PCSK9Q8NBP7 692 aaKnown RBP5.1□□□□□ -1.59
CCDC38-206ENST00000548771 DIS3LQ8TF46 1054 aaKnown RBP5.1□□□□□ -1.59
CCDC38-206ENST00000548771 STAG1Q8WVM7 1258 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 SOCS4Q8WXH5 440 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 MOGAT1Q96PD6 335 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 MACROD1Q9BQ69 325 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 QTRT1Q9BXR0 403 aaKnown RBP5.1□□□□□ -1.59
CCDC38-206ENST00000548771 DPH1Q9BZG8 443 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 ADAMTS5Q9UNA0 930 aa5.1□□□□□ -1.59
CCDC38-206ENST00000548771 NOP58Q9Y2X3 529 aaKnown RBP5.1□□□□□ -1.59
CCDC38-206ENST00000548771 H3BML4 177 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 hCG_1984214I3L0E3 225 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 QSOX1O00391 747 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 MOSPD3O75425 235 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 CYP2C9P11712 490 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 ENGP17813 658 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 LRPAP1P30533 357 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 KRTAP10-6P60371 365 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 MCL1Q07820 350 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 MYO1EQ12965 1108 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms