RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 RUNX3Q13761 415 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 SIM2Q14190 667 aaPredicted RBP16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 TAF12Q16514 161 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 DGKKQ5KSL6 1271 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 LAIR1Q6GTX8 287 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 CCDC73Q6ZRK6 1079 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 ADGRF2Q8IZF7 708 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 CYP2S1Q96SQ9 504 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 ACBD6Q9BR61 282 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 CRTAC1Q9NQ79 661 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 GDAP2Q9NXN4 497 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 GMEB2Q9UKD1 530 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 ITGA11Q9UKX5 1188 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 CEP192Q8TEP8 1941 aa16.34■□□□□ 0.21
SNX29P1-201ENST00000548357 C2orf78A6NCI8 922 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 GDF9O60383 454 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 PDCP20941 246 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 TXLNAP40222 546 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 PNPLA4P41247 253 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 NASPP49321 788 aaPredicted RBP16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 ZNF77Q15935 545 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 CCDC6Q16204 474 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 TMEM196Q5HYL7 178 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 LIMS2Q7Z4I7 341 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 MON1AQ86VX9 555 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 LONP2Q86WA8 852 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 GPD1LQ8N335 351 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 FAM160A2Q8N612 972 aaPredicted RBP16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 LRRC52Q8N7C0 313 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 LINC00301Q8NCQ3 95 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 TRPC7Q9HCX4 862 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 TDP1Q9NUW8 608 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 INTS13Q9NVM9 706 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 TFIP11Q9UBB9 837 aaKnown RBP16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 PCDHB13Q9Y5F0 798 aa16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 MORC2Q9Y6X9 1032 aaPredicted RBP16.33■□□□□ 0.2
SNX29P1-201ENST00000548357 HUS1O60921 280 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 CSH1P0DML2 217 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 CSH2P0DML3 217 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 AVPR1AP37288 418 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 USP46P62068 366 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 ZXDBP98169 803 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 LMNB2Q03252 620 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 SMARCB1Q12824 385 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 USP4Q13107 963 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 PPP2R5DQ14738 602 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 FOXD4L5Q5VV16 416 aaPredicted RBP16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 WDR5BQ86VZ2 330 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 SCN4BQ8IWT1 228 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 TTC16Q8NEE8 873 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 FOXD4L4Q8WXT5 416 aaPredicted RBP16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 SECISBP2LQ93073 1101 aaKnown RBP16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 MYLPFQ96A32 169 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 TMEM30AQ9NV96 361 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 WNT6Q9Y6F9 365 aa16.32■□□□□ 0.2
SNX29P1-201ENST00000548357 TGFB1I1O43294 461 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 STX6O43752 255 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 RNF40O75150 1001 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 RETP07949 1114 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 TMEM191BP0C7N4 346 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 CACNA2D1P54289 1103 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 RBP5P82980 135 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 MYL7Q01449 175 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 NFE2Q16621 373 aaPredicted RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 FAM171BQ6P995 826 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 C1orf228Q6PIY5 440 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 EPM2AIP1Q7L775 607 aaPredicted RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 TMEM86AQ8N2M4 240 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 ARL14EPQ8N8R7 260 aaPredicted RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 MRPS31Q92665 395 aaKnown RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 DHX58Q96C10 678 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 TRMT2BQ96GJ1 504 aaKnown RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 MYRFLQ96LU7 910 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 SYT15Q9BQS2 421 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 MRPL45Q9BRJ2 306 aaKnown RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 TRIM9Q9C026 710 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 ABCB6Q9NP58 842 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 SEMA4GQ9NTN9 838 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 THG1LQ9NWX6 298 aaKnown RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 HSPBP1Q9NZL4 362 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 CDV3Q9UKY7 258 aaKnown RBP16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 RAB23Q9ULC3 237 aa16.31■□□□□ 0.2
SNX29P1-201ENST00000548357 PLXND1Q9Y4D7 1925 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 TRDMT1O14717 391 aaKnown RBP16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 CLIC2O15247 247 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 DDX6P26196 483 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 GJA4P35212 333 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 GALK1P51570 392 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 ALCAMQ13740 583 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 MTF1Q14872 753 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms