RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 LILRA6Q6PI73 481 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 KREMEN2Q8NCW0 462 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 OR10T2Q8NGX3 314 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 MMS19Q96T76 1030 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 RTP3Q9BQQ7 232 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 DESI2Q9BSY9 194 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 XYLT2Q9H1B5 865 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 TRMT1Q9NXH9 659 aaKnown RBP18.52■□□□□ 0.56
HDAC7-227ENST00000548080 NXF1Q9UBU9 619 aaKnown RBP18.52■□□□□ 0.56
HDAC7-227ENST00000548080 C5orf42Q9H799 3197 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 EIF3CLB5ME19 914 aaKnown RBP18.52■□□□□ 0.55
HDAC7-227ENST00000548080 OAZ2O95190 189 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 CYP11A1P05108 521 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 CCDC175P0C221 793 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 PNMA6AP0CW24 399 aaPredicted RBP18.52■□□□□ 0.55
HDAC7-227ENST00000548080 SRGAP2BP0DMP2 458 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 ACAT1P24752 427 aaKnown RBP18.52■□□□□ 0.55
HDAC7-227ENST00000548080 NOP14P78316 857 aaKnown RBP18.52■□□□□ 0.55
HDAC7-227ENST00000548080 RAB33AQ14088 237 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 CCDC142Q17RM4 750 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 SOWAHAQ2M3V2 549 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 ZNF699Q32M78 642 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 WDR72Q3MJ13 1102 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 SLC8B1Q6J4K2 584 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 TMC5Q6UXY8 1006 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 TMEM184AQ6ZMB5 413 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 METTL23Q86XA0 190 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 SHC3Q92529 594 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 TAF4BQ92750 862 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 PGLYRP2Q96PD5 576 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 EIF3CQ99613 913 aaKnown RBP18.52■□□□□ 0.55
HDAC7-227ENST00000548080 DEF6Q9H4E7 631 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 HAUS4Q9H6D7 363 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 APOBEC3GQ9HC16 384 aaKnown RBP18.52■□□□□ 0.55
HDAC7-227ENST00000548080 GDAP2Q9NXN4 497 aa18.52■□□□□ 0.55
HDAC7-227ENST00000548080 C2orf16Q68DN1 1984 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 USP27XA6NNY8 438 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 AKR1B10O60218 316 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 IL9P15248 144 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 TBXAS1P24557 533 aaPredicted RBP18.51■□□□□ 0.55
HDAC7-227ENST00000548080 RAP1GAPP47736 663 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 MRPS5P82675 430 aaKnown RBP18.51■□□□□ 0.55
HDAC7-227ENST00000548080 ASTE1Q2TB18 679 aaPredicted RBP18.51■□□□□ 0.55
HDAC7-227ENST00000548080 LEXMQ3ZCV2 418 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 PTCRAQ6ISU1 281 aaPredicted RBP18.51■□□□□ 0.55
HDAC7-227ENST00000548080 RNF19BQ6ZMZ0 732 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 FAM71AQ8IYT1 594 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 ADGRF2Q8IZF7 708 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 JAKMIP2Q96AA8 810 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 PPP1R13BQ96KQ4 1090 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 SMYD3Q9H7B4 428 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 FBXW11Q9UKB1 542 aa18.51■□□□□ 0.55
HDAC7-227ENST00000548080 IPO7O95373 1038 aaKnown RBP18.5■□□□□ 0.55
HDAC7-227ENST00000548080 SEC24AO95486 1093 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 PAX3P23760 479 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 ANXA13P27216 316 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 ATICP31939 592 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 KIF11P52732 1056 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 TNNC1P63316 161 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 KRT83P78385 493 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 CUL2Q13617 745 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 REXO1L1PQ8IX06 675 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 SMRP1Q8NCR6 262 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 ACRBPQ8NEB7 543 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 KBTBD7Q8WVZ9 684 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 ASB2Q96Q27 587 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 MRPL45Q9BRJ2 306 aaKnown RBP18.5■□□□□ 0.55
HDAC7-227ENST00000548080 S1PR5Q9H228 398 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 RRAGDQ9NQL2 400 aaPredicted RBP18.5■□□□□ 0.55
HDAC7-227ENST00000548080 DZANK1Q9NVP4 752 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 DSEQ9UL01 958 aa18.5■□□□□ 0.55
HDAC7-227ENST00000548080 USP15Q9Y4E8 981 aaPredicted RBP18.5■□□□□ 0.55
HDAC7-227ENST00000548080 DOCK6Q96HP0 2047 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 MBTPS2O43462 519 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 LCA5LO95447 670 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 VNN2O95498 520 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 USP8P40818 1118 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 CDH8P55286 799 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 PTK2Q05397 1052 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 ADCY1Q08828 1119 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 SLC39A12Q504Y0 691 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 ZNF571Q7Z3V5 609 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-227ENST00000548080 TTC9BQ8N6N2 239 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 SLC7A14Q8TBB6 771 aa18.49■□□□□ 0.55
HDAC7-227ENST00000548080 ATXN2LQ8WWM7 1075 aaKnown RBP18.49■□□□□ 0.55
HDAC7-227ENST00000548080 DDX43Q9NXZ2 648 aaKnown RBP18.49■□□□□ 0.55
HDAC7-227ENST00000548080 ARHGEF37A1IGU5 675 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 GOLGA6L9A6NEM1 432 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 OR6C75A6NL08 312 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 C8AP07357 584 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 PDGFRBP09619 1106 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 SPA17Q15506 151 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 ZNF667Q5HYK9 610 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 SMYD5Q6GMV2 418 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 LRRTM3Q86VH5 581 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 VPS36Q86VN1 386 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 THEM5Q8N1Q8 247 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 TOP6BLQ8N6T0 577 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 FAXDC2Q96IV6 333 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 LPIN3Q9BQK8 851 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms