RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 SEL1L2Q5TEA6 688 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 OTOP2Q7RTS6 562 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 ARHGAP18Q8N392 663 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 XXYLT1Q8NBI6 393 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 FBXO25Q8TCJ0 367 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 SHC3Q92529 594 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 VWCEQ96DN2 955 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 CHMP6Q96FZ7 201 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 ZNF317Q96PQ6 595 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 ACCSQ96QU6 501 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 XPO6Q96QU8 1125 aaKnown RBP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 MXRA8Q9BRK3 442 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 TSEN34Q9BSV6 310 aaKnown RBP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 FAM192AQ9GZU8 254 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 MROH8Q9H579 483 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 IL23AQ9NPF7 189 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 PNMA2Q9UL42 364 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 SH3GLB1Q9Y371 365 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 COQ4Q9Y3A0 265 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 MTCH2Q9Y6C9 303 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 EMSYQ7Z589 1322 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 PRRC2BQ5JSZ5 2229 aaKnown RBP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 TMEM110-MUSTN1A8MSY1 372 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 FTLP02792 175 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 RARGP13631 454 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 AKR1A1P14550 325 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 CCND1P24385 295 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 TMOD1P28289 359 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 TCF7P36402 384 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 RARRES1P49788 294 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 NCKAP1LP55160 1127 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 MXRA7P84157 204 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 PPP3CAQ08209 521 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 TMEM62Q0P6H9 643 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
TMEM116-205ENST00000547878 QPCTQ16769 361 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 AAK1Q2M2I8 961 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 ACCSLQ4AC99 568 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 C6orf118Q5T5N4 469 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 FAM126BQ8IXS8 530 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 SLC15A3Q8IY34 581 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 TMEM199Q8N511 208 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 SLC20A1Q8WUM9 679 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 GLG1Q92896 1179 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 ART4Q93070 314 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 SEC16BQ96JE7 1060 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 OSBPL1AQ9BXW6 950 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 OSBPL7Q9BZF2 842 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 ADAM7Q9H2U9 754 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 CERS4Q9HA82 394 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 POLD4Q9HCU8 107 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 CTTNBP2NLQ9P2B4 639 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 MTUS1Q9ULD2 1270 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 C2CD2Q9Y426 696 aa9.17□□□□□ -0.94
TMEM116-205ENST00000547878 COL11A1P12107 1806 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ZBTB39O15060 712 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 DHX15O43143 795 aaKnown RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ARHGEF15O94989 841 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ARP10275 920 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 GTF2H1P32780 548 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 MAN1A1P33908 653 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 RPL21P46778 160 aaKnown RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 GPC3P51654 580 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 PTK7Q13308 1070 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 SIX1Q15475 284 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ARHGAP44Q17R89 818 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 CCDC137Q6PK04 289 aaKnown RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 SYDE1Q6ZW31 735 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 TRMT10CQ7L0Y3 403 aaKnown RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ERICH1Q86X53 443 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 SLC13A5Q86YT5 568 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 KSR1Q8IVT5 923 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ARHGEF19Q8IW93 802 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 LMNTD2Q8IXW0 634 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 SPICE1Q8N0Z3 855 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 TRPC4APQ8TEL6 797 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 CCT6BQ92526 530 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 NCSTNQ92542 709 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 KRT35Q92764 455 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 RNF25Q96BH1 459 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 C18orf8Q96DM3 657 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 MMP19Q99542 508 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 CGREF1Q99674 301 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 CCDC28BQ9BUN5 200 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 PLVAPQ9BX97 442 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ROPN1BQ9BZX4 212 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 LRRC19Q9H756 370 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 ROPN1Q9HAT0 212 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 UBE2TQ9NPD8 197 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 MAP3K20Q9NYL2 800 aaKnown RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 HSPBP1Q9NZL4 362 aa9.16□□□□□ -0.94
TMEM116-205ENST00000547878 RABL2AQ9UBK7 228 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-205ENST00000547878 USP34Q70CQ2 3546 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms