RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 DRC7Q8IY82 874 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 CCDC33Q8N5R6 958 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 GPATCH11Q8N954 259 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 SMG7Q92540 1137 aaKnown RBP5□□□□□ -1.61
SCAF11-210ENST00000547654 PPM1MQ96MI6 270 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 NEUROD6Q96NK8 337 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 RNF7Q9UBF6 113 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 NOX1Q9Y5S8 564 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 NR2E3Q9Y5X4 410 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 CFAP20Q9Y6A4 193 aaKnown RBP5□□□□□ -1.61
SCAF11-210ENST00000547654 BAZ1AQ9NRL2 1556 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 POM121BA6NF01 834 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 CCER2I3L3R5 266 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 J3KRW8 73 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 ADAMTS3O15072 1205 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 HTRA2O43464 458 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 FRS3O43559 492 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 NCK2O43639 380 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 ZFPL1O95159 310 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 MYF5P13349 255 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 GSPT1P15170 499 aaKnown RBP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 TNFAIP3P21580 790 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 GCSHP23434 173 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 SLC6A2P23975 617 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 TARDBPQ13148 414 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 GRM1Q13255 1194 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 DACT2Q5SW24 774 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 GJC2Q5T442 439 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 SWSAP1Q6NVH7 229 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 APOA5Q6Q788 366 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 LIX1LQ8IVB5 337 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 SYTL1Q8IYJ3 562 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 ZNF527Q8NB42 609 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 OR56A1Q8NGH5 318 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 NSUN6Q8TEA1 469 aaKnown RBP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 ZNF384Q8TF68 577 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 STON2Q8WXE9 905 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 NACC2Q96BF6 587 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 APIPQ96GX9 242 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 ZC3H10Q96K80 434 aaKnown RBP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 Q96MF0 132 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 MRI1Q9BV20 369 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 LDAHQ9H6V9 325 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 TMEM74BQ9NUR3 256 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 AJAP1Q9UKB5 411 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-210ENST00000547654 OGDHLQ9ULD0 1010 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 LIMCH1Q9UPQ0 1083 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 GPR52Q9Y2T5 361 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 PCDHGB2Q9Y5G2 931 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 ACTL7AQ9Y615 435 aa4.99□□□□□ -1.61
SCAF11-210ENST00000547654 PHGDHO43175 533 aaKnown RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 SKAP2O75563 359 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 CSTBP04080 98 aaKnown RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 SNRPA1P09661 255 aaKnown RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 RAB1AP62820 205 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 SIM1P81133 766 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 OCA2Q04671 838 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 SLFN5Q08AF3 891 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 UBXN2BQ14CS0 331 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 TAF12Q16514 161 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 C3orf36Q3SXR2 165 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 ATXN7L2Q5T6C5 722 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 MAPKAPK5Q8IW41 473 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 C1orf131Q8NDD1 294 aaKnown RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 IL17REQ8NFR9 667 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 NRG4Q8WWG1 115 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 DPF2Q92785 391 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 RNF31Q96EP0 1072 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 TMEM41AQ96HV5 264 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 MRGPRX4Q96LA9 322 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 ADI1Q9BV57 179 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 ALOXE3Q9BYJ1 711 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 C22orf23Q9BZE7 217 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 REXO4Q9GZR2 422 aaKnown RBP4.98□□□□□ -1.61
SCAF11-210ENST00000547654 ZNF287Q9HBT7 754 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 LANCL2Q9NS86 450 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 LRIT1Q9P2V4 623 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 HDAC9Q9UKV0 1011 aa4.98□□□□□ -1.61
SCAF11-210ENST00000547654 A0A1W2PPL8 197 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 NCAM2O15394 837 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 SLC16A6O15403 523 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 RBMXL2O75526 392 aaKnown RBP4.97□□□□□ -1.61
SCAF11-210ENST00000547654 ENDOD1O94919 500 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 IL2RBP14784 551 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 SMARCA1P28370 1054 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 PTPN7P35236 360 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 ABCG1P45844 678 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 MAP2K6P52564 334 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 MRPS35P82673 323 aaKnown RBP4.97□□□□□ -1.61
SCAF11-210ENST00000547654 POU5F1Q01860 360 aaKnown RBP4.97□□□□□ -1.61
SCAF11-210ENST00000547654 NHLH1Q02575 133 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 ZNF543Q08ER8 600 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 PMS2P11Q13670 270 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 PRKG1Q13976 671 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 FGL2Q14314 439 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 ZNF169Q14929 603 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-210ENST00000547654 NOMO1Q15155 1222 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 Q6ZNX1 250 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 RFX8Q6ZV50 586 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 MICALCLQ6ZW33 695 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms