RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	TRIM43B	A6NCK2	446 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	MASP2	O00187	686 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	PEX1	O43933	1283 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	TBC1D4	O60343	1298 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	MGEA5	O60502	916 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	PPP3CB	P16298	524 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	ZNF134	P52741	427 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	FMO1	Q01740	532 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	SLC13A2	Q13183	592 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	CTBP1	Q13363	440 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	RAB32	Q13637	225 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	ZNF169	Q14929	603 aa	Predicted RBP	5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	HSP90AB2P	Q58FF8	381 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	RBM20	Q5T481	1227 aa	Known RBP	5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	LCE1A	Q5T7P2	110 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	DNAJC5G	Q8N7S2	189 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	MAML1	Q92585	1016 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	PDLIM2	Q96JY6	352 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	PTDSS2	Q9BVG9	487 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	BTBD1	Q9H0C5	482 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	XPNPEP3	Q9NQH7	507 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	FOXJ2	Q9P0K8	574 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	SHOC2	Q9UQ13	582 aa		5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	POLR2A	P24928	1970 aa	Known RBP	5.52	□□□□□ -1.53
LGR5-204	ENST00000547310	CCDC151	A5D8V7	595 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	MYO1C	O00159	1063 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	PEX2	P28328	305 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	CD6	P30203	668 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	LRPAP1	P30533	357 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	PXN	P49023	591 aa	Predicted RBP	5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	SLC44A4	Q53GD3	710 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	EPHA10	Q5JZY3	1008 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	ICE2	Q659A1	982 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	SYCE2	Q6PIF2	218 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	TMEM108	Q6UXF1	575 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	DTX2	Q86UW9	622 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	MICU3	Q86XE3	530 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	SLC44A3	Q8N4M1	653 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	B3GALNT2	Q8NCR0	500 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	MYCBPAP	Q8TBZ2	947 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	FAM136A	Q96C01	138 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	TIFA	Q96CG3	184 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	ALG8	Q9BVK2	526 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	SARG	Q9BW04	601 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	NUP62CL	Q9H1M0	184 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	A1CF	Q9NQ94	594 aa	Known RBP	5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	KLC4	Q9NSK0	619 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	STK32B	Q9NY57	414 aa		5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	AFF4	Q9UHB7	1163 aa	Known RBP	5.51	□□□□□ -1.53
LGR5-204	ENST00000547310	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	MBD3L3	A6NE82	208 aa	Predicted RBP	5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	FOXN3	O00409	490 aa	Predicted RBP	5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	LMNA	P02545	664 aa	Known RBP	5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	TRIM27	P14373	513 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	CHRM3	P20309	590 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	GNAL	P38405	381 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	SUMO3	P55854	103 aa	Predicted RBP	5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	MRPS35	P82673	323 aa	Known RBP	5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	PRR16	Q569H4	304 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	CCDC181	Q5TID7	509 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	LAYN	Q6UX15	382 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	SLC15A4	Q8N697	577 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	TTYH3	Q9C0H2	523 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	KIAA1586	Q9HCI6	787 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	CPNE7	Q9UBL6	633 aa		5.5	□□□□□ -1.53
LGR5-204	ENST00000547310	SALL3	Q9BXA9	1300 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	BRAF	P15056	766 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	PHKG2	P15735	406 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	RARRES1	P49788	294 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	LILRA4	P59901	499 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	SATB1	Q01826	763 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	FSTL1	Q12841	308 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	VPS53	Q5VIR6	699 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	OLFML1	Q6UWY5	402 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	PHKB	Q93100	1093 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	FBXL20	Q96IG2	436 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	STRBP	Q96SI9	672 aa	Known RBP	5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	BRIP1	Q9BX63	1249 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	TPSD1	Q9BZJ3	242 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	LRIT1	Q9P2V4	623 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	SSX2IP	Q9Y2D8	614 aa		5.49	□□□□□ -1.53
LGR5-204	ENST00000547310	ADGRA2	Q96PE1	1338 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	CDK4	P11802	303 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	KLRC1	P26715	233 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	DGKE	P52429	567 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	SIM1	P81133	766 aa	Predicted RBP	5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	ERCC6L	Q2NKX8	1250 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	MGAT5B	Q3V5L5	792 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	TEDDM1	Q5T9Z0	273 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	KAZN	Q674X7	775 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	PPP4R4	Q6NUP7	873 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	C11orf96	Q7Z7L8	435 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	SESTD1	Q86VW0	696 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	FBXO41	Q8TF61	875 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	RFK	Q969G6	155 aa		5.48	□□□□□ -1.53
LGR5-204	ENST00000547310	CCDC136	Q96JN2	1154 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms