RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 SMARCD2Q92925 531 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 PBXIP1Q96AQ6 731 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 ELSPBP1Q96BH3 223 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 MYRFLQ96LU7 910 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 DUSP9Q99956 384 aaKnown RBP12.67□□□□□ -0.38
YBX3-217ENST00000546164 RPP25Q9BUL9 199 aaKnown RBP12.67□□□□□ -0.38
YBX3-217ENST00000546164 BCO2Q9BYV7 579 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 IMPG2Q9BZV3 1241 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 SDCBP2Q9H190 292 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 METTL14Q9HCE5 456 aaKnown RBP12.67□□□□□ -0.38
YBX3-217ENST00000546164 MAGEC2Q9UBF1 373 aaPredicted RBP12.67□□□□□ -0.38
YBX3-217ENST00000546164 WNT16Q9UBV4 365 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 ARMCX3Q9UH62 379 aaPredicted RBP12.67□□□□□ -0.38
YBX3-217ENST00000546164 ZMYM5Q9UJ78 669 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 A0A1W2PRU2 124 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 SOBPA7XYQ1 873 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 BIN1O00499 593 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 NARSO43776 548 aaKnown RBP12.66□□□□□ -0.38
YBX3-217ENST00000546164 GJA1P17302 382 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
YBX3-217ENST00000546164 GABRR2P28476 465 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 WEE1P30291 646 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 CDC25CP30307 473 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 GPR15P49685 360 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 CDR1P51861 262 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 CDH8P55286 799 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 NOP14P78316 857 aaKnown RBP12.66□□□□□ -0.38
YBX3-217ENST00000546164 PAK1Q13153 545 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 TEAD2Q15562 447 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 CAMK4Q16566 473 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 DDR2Q16832 855 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 FAM78AQ5JUQ0 283 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 SPOPLQ6IQ16 392 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 KLHL10Q6JEL2 608 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 FRMD5Q7Z6J6 570 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 UNC93AQ86WB7 457 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 FBXL6Q8N531 539 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 B3GALNT2Q8NCR0 500 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 NELFBQ8WX92 580 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 TRMT2BQ96GJ1 504 aaKnown RBP12.66□□□□□ -0.38
YBX3-217ENST00000546164 SPATA17Q96L03 361 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 ZSWIM3Q96MP5 696 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 GBP4Q96PP9 640 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 NIF3L1Q9GZT8 377 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 ATXN3LQ9H3M9 355 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 DPEP3Q9H4B8 488 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 CLSTN2Q9H4D0 955 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 CYP3A43Q9HB55 503 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 APOBEC3GQ9HC16 384 aaKnown RBP12.66□□□□□ -0.38
YBX3-217ENST00000546164 LMBRD1Q9NUN5 540 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 COQ4Q9Y3A0 265 aa12.66□□□□□ -0.38
YBX3-217ENST00000546164 PMM2O15305 246 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 F11P03951 625 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 BDNFP23560 247 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 RAP1GAPP47736 663 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 NLRP12P59046 1061 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 INCA1Q0VD86 236 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 TAF12Q16514 161 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 SCARA5Q6ZMJ2 495 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 TMEM150AQ86TG1 271 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 CRYBG2Q8N1P7 616 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 CCDC150Q8NCX0 1101 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 FBXL13Q8NEE6 735 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
YBX3-217ENST00000546164 SLC35C1Q96A29 364 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 E2F7Q96AV8 911 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 ELMO3Q96BJ8 720 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 TNIP3Q96KP6 325 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 C8orf48Q96LL4 319 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 GCNAQ96QF7 691 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 KXD1Q9BQD3 176 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 ELOVL4Q9GZR5 314 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 FAM124BQ9H5Z6 455 aaPredicted RBP12.65□□□□□ -0.38
YBX3-217ENST00000546164 ZFP14Q9HCL3 533 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 RAB20Q9NX57 234 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 UXTQ9UBK9 157 aaPredicted RBP12.65□□□□□ -0.38
YBX3-217ENST00000546164 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
YBX3-217ENST00000546164 CACNA1HO95180 2353 aa12.65□□□□□ -0.38
YBX3-217ENST00000546164 SLC38A8A6NNN8 435 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 TRIM66O15016 1216 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 CLSTN1O94985 981 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 GNA14O95837 355 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 PDGFBP01127 241 aaPredicted RBP12.64□□□□□ -0.39
YBX3-217ENST00000546164 COL9A1P20849 921 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.39
YBX3-217ENST00000546164 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
YBX3-217ENST00000546164 GPC5P78333 572 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 PFKPQ01813 784 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 CYP27A1Q02318 531 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 CBWD6Q4V339 395 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 ARHGAP15Q53QZ3 475 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
YBX3-217ENST00000546164 CBWD3Q5JTY5 395 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 CBWD5Q5RIA9 395 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms