RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 FAM171A1Q5VUB5 890 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 WSCD1Q658N2 575 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 PDE12Q6L8Q7 609 aaKnown RBP10.33□□□□□ -0.76
DDB1-225ENST00000545930 ZNF280DQ6N043 979 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 PPP1R2P3Q6NXS1 205 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 CYP26C1Q6V0L0 522 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 CEP57Q86XR8 500 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 DCP1BQ8IZD4 617 aaKnown RBP10.33□□□□□ -0.76
DDB1-225ENST00000545930 CRYBG2Q8N1P7 616 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 TC2NQ8N9U0 490 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 HASPINQ8TF76 798 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 HEXIM2Q96MH2 286 aaKnown RBP10.33□□□□□ -0.76
DDB1-225ENST00000545930 C11orf84Q9BUA3 381 aaPredicted RBP10.33□□□□□ -0.76
DDB1-225ENST00000545930 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDB1-225ENST00000545930 DDX43Q9NXZ2 648 aaKnown RBP10.33□□□□□ -0.76
DDB1-225ENST00000545930 CDH9Q9ULB4 789 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 L1RE1Q9UN81 338 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 STXBP5LQ9Y2K9 1186 aa10.33□□□□□ -0.76
DDB1-225ENST00000545930 SSU72P8A0A1W2PR75 194 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 LINC01553A4QN01 128 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 B4GALT3O60512 393 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 URODP06132 367 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 VDRP11473 427 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 TIMP2P16035 220 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 ACO1P21399 889 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 GNA15P30679 374 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 CTNNB1P35222 781 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 CYLC1P35663 651 aaPredicted RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 SLC8A3P57103 927 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 SMAD3P84022 425 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 APBA1Q02410 837 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 MRPL58Q14197 206 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 SGO2Q562F6 1265 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 SCARA3Q6AZY7 606 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 CD300LGQ6UXG3 332 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 IRF2BP2Q7Z5L9 587 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 BPHLQ86WA6 291 aaPredicted RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 TMTC1Q8IUR5 882 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 LRRC8AQ8IWT6 810 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 CCDC170Q8IYT3 715 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 UBR7Q8N806 425 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 RBBP8NLQ8NC74 664 aaPredicted RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 ARMC2Q8NEN0 867 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 RABGGTAQ92696 567 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 KAT5Q92993 513 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 MRPL45Q9BRJ2 306 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 HERC2P3Q9BVR0 1158 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 GPR62Q9BZJ7 368 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 GPR88Q9GZN0 384 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 PDCL3Q9H2J4 239 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 DEF6Q9H4E7 631 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 SMYD3Q9H7B4 428 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 SLC28A3Q9HAS3 691 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 NGRNQ9NPE2 291 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 MRPL17Q9NRX2 175 aaKnown RBP10.32□□□□□ -0.76
DDB1-225ENST00000545930 MARCH5Q9NX47 278 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 CACNG4Q9UBN1 327 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 CEP83Q9Y592 693 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 ATP8B3O60423 1300 aa10.32□□□□□ -0.76
DDB1-225ENST00000545930 CYP26A1O43174 497 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 THAP12O43422 761 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 IPO7O95373 1038 aaKnown RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 ITGB1P05556 798 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 PTPN1P18031 435 aaKnown RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 TNFAIP3P21580 790 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 TKTP29401 623 aaKnown RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 RAP1GAPP47736 663 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 GLUD2P49448 558 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 RABGGTBP53611 331 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 RAD23BP54727 409 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 SNX16P57768 344 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 ERVK-21P61565 698 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 DSG1Q02413 1049 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 ARID5AQ03989 594 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 CNGA2Q16280 664 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 NFE2Q16621 373 aaPredicted RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 MEA1Q16626 185 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 CTXN3Q4LDR2 81 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 ZNF394Q53GI3 561 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 TRIM72Q6ZMU5 477 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 C4orf50Q6ZRC1 276 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 RNF168Q8IYW5 571 aaPredicted RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 VPS52Q8N1B4 723 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 KLHL23Q8NBE8 558 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 SLC4A11Q8NBS3 891 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 KBTBD7Q8WVZ9 684 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 TRIM44Q96DX7 344 aaPredicted RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 CCDC42Q96M95 316 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 ARID3AQ99856 593 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 BAG1Q99933 345 aaPredicted RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 PBX4Q9BYU1 374 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 SDCBP2Q9H190 292 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 LUC7LQ9NQ29 371 aaKnown RBP10.31□□□□□ -0.76
DDB1-225ENST00000545930 CHST7Q9NS84 486 aa10.31□□□□□ -0.76
DDB1-225ENST00000545930 FNIP2Q9P278 1114 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms