RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ATRIPQ8WXE1 791 aa21.29■■□□□ 1
CHD4-213ENST00000545584 PAGE5Q96GU1 130 aa21.29■■□□□ 1
CHD4-213ENST00000545584 PKMYT1Q99640 499 aa21.29■■□□□ 1
CHD4-213ENST00000545584 SYT15Q9BQS2 421 aa21.29■■□□□ 1
CHD4-213ENST00000545584 CHRDQ9H2X0 955 aa21.29■■□□□ 1
CHD4-213ENST00000545584 MAGEC2Q9UBF1 373 aaPredicted RBP21.29■■□□□ 1
CHD4-213ENST00000545584 PATJQ8NI35 1801 aa21.28■■□□□ 1
CHD4-213ENST00000545584 A0A1B0GVL5 298 aa21.28■■□□□ 1
CHD4-213ENST00000545584 MYBPHLA2RUH7 354 aa21.28■■□□□ 1
CHD4-213ENST00000545584 PFKFB1P16118 471 aa21.28■■□□□ 1
CHD4-213ENST00000545584 WARSP23381 471 aaKnown RBP21.28■■□□□ 1
CHD4-213ENST00000545584 TNNC1P63316 161 aa21.28■■□□□ 1
CHD4-213ENST00000545584 MTAPQ13126 283 aa21.28■■□□□ 1
CHD4-213ENST00000545584 PSMD2Q13200 908 aa21.28■■□□□ 1
CHD4-213ENST00000545584 FAM171BQ6P995 826 aa21.28■■□□□ 1
CHD4-213ENST00000545584 RALGPS2Q86X27 583 aaPredicted RBP21.28■■□□□ 1
CHD4-213ENST00000545584 ZFYVE19Q96K21 471 aa21.28■■□□□ 1
CHD4-213ENST00000545584 LRRC3BQ96PB8 259 aa21.28■■□□□ 1
CHD4-213ENST00000545584 SNX25Q9H3E2 840 aa21.28■■□□□ 1
CHD4-213ENST00000545584 ATP6V1DQ9Y5K8 247 aa21.28■■□□□ 1
CHD4-213ENST00000545584 USP34Q70CQ2 3546 aa21.28■■□□□ 1
CHD4-213ENST00000545584 COL4A2P08572 1712 aa21.27■■□□□ 1
CHD4-213ENST00000545584 HCRTO43612 131 aa21.27■■□□□ 1
CHD4-213ENST00000545584 ACTN4O43707 911 aaKnown RBP21.27■■□□□ 1
CHD4-213ENST00000545584 PHACTR2O75167 634 aa21.27■■□□□ 1
CHD4-213ENST00000545584 NOL4O94818 638 aa21.27■■□□□ 1
CHD4-213ENST00000545584 CST3P01034 146 aaPredicted RBP21.27■■□□□ 1
CHD4-213ENST00000545584 MYL1P05976 194 aa21.27■■□□□ 1
CHD4-213ENST00000545584 MAGEA11P43364 429 aa21.27■■□□□ 1
CHD4-213ENST00000545584 PSMC1P62191 440 aaKnown RBP21.27■■□□□ 1
CHD4-213ENST00000545584 LRRC32Q14392 662 aa21.27■■□□□ 1
CHD4-213ENST00000545584 LIMS2Q7Z4I7 341 aa21.27■■□□□ 1
CHD4-213ENST00000545584 TMEM150AQ86TG1 271 aa21.27■■□□□ 1
CHD4-213ENST00000545584 MON1AQ86VX9 555 aa21.27■■□□□ 1
CHD4-213ENST00000545584 ZNF687Q8N1G0 1237 aa21.27■■□□□ 1
CHD4-213ENST00000545584 STKLD1Q8NE28 680 aa21.27■■□□□ 1
CHD4-213ENST00000545584 KBTBD7Q8WVZ9 684 aa21.27■■□□□ 1
CHD4-213ENST00000545584 CCDC47Q96A33 483 aaKnown RBP21.27■■□□□ 1
CHD4-213ENST00000545584 TRMT2BQ96GJ1 504 aaKnown RBP21.27■■□□□ 1
CHD4-213ENST00000545584 MYRFLQ96LU7 910 aa21.27■■□□□ 1
CHD4-213ENST00000545584 SMG9Q9H0W8 520 aaKnown RBP21.27■■□□□ 1
CHD4-213ENST00000545584 KIF9Q9HAQ2 790 aa21.27■■□□□ 1
CHD4-213ENST00000545584 ZSCAN32Q9NX65 697 aa21.27■■□□□ 1
CHD4-213ENST00000545584 GTSE1Q9NYZ3 720 aa21.27■■□□□ 1
CHD4-213ENST00000545584 PCDHGA2Q9Y5H1 932 aa21.27■■□□□ 1
CHD4-213ENST00000545584 SPECC1L-ADORA2AF8WAN1 911 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 KLRC4O43908 158 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 ATP2C2O75185 946 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 CLSTN1O94985 981 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 PDGFRBP09619 1106 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 FAM163BP0C2L3 166 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 LMO2P25791 158 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 CTHP32929 405 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 GNL1P36915 607 aaPredicted RBP21.26■□□□□ 0.99
CHD4-213ENST00000545584 WDR72Q3MJ13 1102 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 KMT5BQ4FZB7 885 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 TXNDC8Q6A555 127 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 CC2D1AQ6P1N0 951 aaPredicted RBP21.26■□□□□ 0.99
CHD4-213ENST00000545584 VSTM1Q6UX27 236 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 FSIP1Q8NA03 581 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 OR6B3Q8NGW1 331 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 TTC8Q8TAM2 541 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 MYLPFQ96A32 169 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 HINFPQ9BQA5 517 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 FAM126AQ9BYI3 521 aaPredicted RBP21.26■□□□□ 0.99
CHD4-213ENST00000545584 PRMT8Q9NR22 394 aaPredicted RBP21.26■□□□□ 0.99
CHD4-213ENST00000545584 TDP1Q9NUW8 608 aa21.26■□□□□ 0.99
CHD4-213ENST00000545584 TACC1O75410 805 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 CHRNB1P11230 501 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 ANXA13P27216 316 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 ATICP31939 592 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 GRIK1P39086 918 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 SYKP43405 635 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 SOX9P48436 509 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 CCR3P51677 355 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 AP3M2P53677 418 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 CYP27A1Q02318 531 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 STK4Q13043 487 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 CCDC142Q17RM4 750 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 ITPRIPL2Q3MIP1 535 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 MAMSTRQ6ZN01 415 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 FANCMQ8IYD8 2048 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 SYAP1Q96A49 352 aaPredicted RBP21.25■□□□□ 0.99
CHD4-213ENST00000545584 GKN1Q9NS71 199 aa21.25■□□□□ 0.99
CHD4-213ENST00000545584 STAU1O95793 577 aaKnown RBP21.24■□□□□ 0.99
CHD4-213ENST00000545584 NRLP54845 237 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 BIRC3Q13489 604 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 DGKKQ5KSL6 1271 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 TSSK4Q6SA08 328 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 KIAA0895Q8NCT3 520 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 MYCBPAPQ8TBZ2 947 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 ZNF516Q92618 1163 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 USP13Q92995 863 aaPredicted RBP21.24■□□□□ 0.99
CHD4-213ENST00000545584 CEP295NLQ96MC4 621 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 MRPL45Q9BRJ2 306 aaKnown RBP21.24■□□□□ 0.99
CHD4-213ENST00000545584 SCAND2PQ9GZW5 306 aaPredicted RBP21.24■□□□□ 0.99
CHD4-213ENST00000545584 TRPC7Q9HCX4 862 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 CRTAC1Q9NQ79 661 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 EHD2Q9NZN4 543 aa21.24■□□□□ 0.99
CHD4-213ENST00000545584 DENND4CQ5VZ89 1909 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms