RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 CDKL5O76039 1030 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 NTRK1P04629 796 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 HAPLN1P10915 354 aaPredicted RBP7.89□□□□□ -1.15
COPA-207ENST00000545284 CDK4P11802 303 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 RPS6KB1P23443 525 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 RPA1P27694 616 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 OPRD1P41143 372 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 GRIA2P42262 883 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 LILRA4P59901 499 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 OSTNP61366 133 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 CCT2P78371 535 aaKnown RBP7.89□□□□□ -1.15
COPA-207ENST00000545284 CFHR1Q03591 330 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 KCNC4Q03721 635 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 USP4Q13107 963 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 DMP1Q13316 513 aaPredicted RBP7.89□□□□□ -1.15
COPA-207ENST00000545284 SMAD1Q15797 465 aaKnown RBP7.89□□□□□ -1.15
COPA-207ENST00000545284 SLC39A12Q504Y0 691 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 NAIF1Q69YI7 327 aaPredicted RBP7.89□□□□□ -1.15
COPA-207ENST00000545284 EFCAB13Q8IY85 973 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 ABCA7Q8IZY2 2146 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 THEM5Q8N1Q8 247 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 FSIP1Q8NA03 581 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 TXNDC5Q8NBS9 432 aaKnown RBP7.89□□□□□ -1.15
COPA-207ENST00000545284 CAMK1GQ96NX5 476 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 MTMR9Q96QG7 549 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 PNKPQ96T60 521 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 LPIN3Q9BQK8 851 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 NTPCRQ9BSD7 190 aaKnown RBP7.89□□□□□ -1.15
COPA-207ENST00000545284 ARHGAP28Q9P2N2 729 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 USP20Q9Y2K6 914 aa7.89□□□□□ -1.15
COPA-207ENST00000545284 NUP205Q92621 2012 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 EML5Q05BV3 1969 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 KALRNO60229 2985 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 NUP210Q8TEM1 1887 aaPredicted RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 TRAV19A0A0A6YYK7 116 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 TTC26A0AVF1 554 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 SLC9A3R1O14745 358 aaPredicted RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 FLRT2O43155 660 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 NEMFO60524 1076 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 CER1O95813 267 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 APODP05090 189 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 CLTAP09496 248 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 HLA-EP13747 358 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 U2AF2P26368 475 aaKnown RBP eCLIP7.88□□□□□ -1.159e-16■■■■□ 20.2
COPA-207ENST00000545284 EIF2S3P41091 472 aaKnown RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 TXKP42681 527 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 KIR2DL1P43626 348 aaPredicted RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 NFE2Q16621 373 aaPredicted RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 PLEKHG6Q3KR16 790 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 DIEXFQ68CQ4 756 aaKnown RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 ZPBP2Q6X784 338 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 TMPRSS12Q86WS5 348 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 METTL23Q86XA0 190 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 CD302Q8IX05 232 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 DCP1BQ8IZD4 617 aaKnown RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 ADGRG2Q8IZP9 1017 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 PGBD3Q8N328 593 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 CCDC33Q8N5R6 958 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 ALLCQ8N6M5 410 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 TTC9BQ8N6N2 239 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 ENGASEQ8NFI3 743 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 RIN3Q8TB24 985 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 BAHD1Q8TBE0 780 aaPredicted RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 SPATA18Q8TC71 538 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 HMGB4Q8WW32 186 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 SENP8Q96LD8 212 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 CEP295NLQ96MC4 621 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 JAKMIP1Q96N16 626 aaKnown RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 PNMA5Q96PV4 448 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 NCOA5Q9HCD5 579 aaKnown RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 ABCB6Q9NP58 842 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 CIZ1Q9ULV3 898 aaPredicted RBP7.88□□□□□ -1.15
COPA-207ENST00000545284 ARHGAP26Q9UNA1 814 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
COPA-207ENST00000545284 ATXN2Q99700 1313 aaKnown RBP7.87□□□□□ -1.15
COPA-207ENST00000545284 A0A1B0GTW7 788 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 CCDC169A6NNP5 214 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 SGK1O00141 431 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 CLDN3O15551 220 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 TNFSF14O43557 240 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 SOAT2O75908 522 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 KAT7O95251 611 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 KLF8O95600 359 aaPredicted RBP7.87□□□□□ -1.15
COPA-207ENST00000545284 CKMP06732 381 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 ADRB2P07550 413 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 NFICP08651 508 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 CHRM1P11229 460 aaPredicted RBP7.87□□□□□ -1.15
COPA-207ENST00000545284 HNRNPLP14866 589 aaKnown RBP eCLIP7.87□□□□□ -1.15
COPA-207ENST00000545284 SCP2P22307 547 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 NMT1P30419 496 aaKnown RBP7.87□□□□□ -1.15
COPA-207ENST00000545284 NPTX2P47972 431 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 SEC13P55735 322 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 RPL10AP62906 217 aaKnown RBP7.87□□□□□ -1.15
COPA-207ENST00000545284 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 MCL1Q07820 350 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 NOLC1Q14978 699 aaKnown RBP eCLIP7.87□□□□□ -1.15
COPA-207ENST00000545284 SPATA1Q5VX52 437 aa7.87□□□□□ -1.15
COPA-207ENST00000545284 HAUS3Q68CZ6 603 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms