RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 USP39Q53GS9 565 aaKnown RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 UTP14CQ5TAP6 766 aaKnown RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 ARHGEF16Q5VV41 709 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 ZNF787Q6DD87 383 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 KIAA0907Q7Z7F0 614 aaPredicted RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 VSIG10LQ86VR7 867 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 HOMER1Q86YM7 354 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 TAB3Q8N5C8 712 aaPredicted RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 OR2I1PQ8NGU4 316 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 TMEM40Q8WWA1 233 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 ING5Q8WYH8 240 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 TMEM176AQ96HP8 235 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 APOL6Q9BWW8 343 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 RNF41Q9H4P4 317 aaPredicted RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 ZFP14Q9HCL3 533 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 CHST12Q9NRB3 414 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 KRT82Q9NSB4 513 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 PCDHA4Q9UN74 947 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 STX8Q9UNK0 236 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 STARD13Q9Y3M8 1113 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 PCDHA2Q9Y5H9 948 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 hCG_2014768A0A024R1R8 64 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 RRN3P2A6NIE6 340 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 B4E1Z4 1266 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 ZNF213O14771 459 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 RANBP6O60518 1105 aaKnown RBP7.51□□□□□ -1.21
LDHA-223ENST00000545215 ECEL1O95672 775 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 SOD2P04179 222 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 CFIP05156 583 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 SERPINF2P08697 491 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 BCKDHBP21953 392 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 HOXD12P35452 270 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 SLC16A2P36021 539 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 MAP2K3P46734 347 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 SLC11A1P49279 550 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 IGBP1P78318 339 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 KRT32Q14532 448 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 INPP5AQ14642 412 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 RTP5Q14D33 572 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 DUOXA1Q1HG43 343 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 WIPI1Q5MNZ9 446 aaPredicted RBP7.51□□□□□ -1.21
LDHA-223ENST00000545215 BROXQ5VW32 411 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 LRFN4Q6PJG9 635 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 TAS1R1Q7RTX1 841 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 FILIP1Q7Z7B0 1213 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 ZNF589Q86UQ0 364 aaPredicted RBP7.51□□□□□ -1.21
LDHA-223ENST00000545215 RALGPS2Q86X27 583 aaPredicted RBP7.51□□□□□ -1.21
LDHA-223ENST00000545215 MMP21Q8N119 569 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 CEP76Q8TAP6 659 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 RSPH1Q8WYR4 309 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 LSG1Q9H089 658 aaKnown RBP7.51□□□□□ -1.21
LDHA-223ENST00000545215 TOMM22Q9NS69 142 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 ANAPC4Q9UJX5 808 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 PILRBQ9UKJ0 227 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 PRKAB1Q9Y478 270 aa7.51□□□□□ -1.21
LDHA-223ENST00000545215 B2RBV5 119 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 SPECC1L-ADORA2AF8WAN1 911 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 ZNF263O14978 683 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 NMT2O60551 498 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 DNAJC6O75061 913 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 FGAP02671 866 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 CYP11A1P05108 521 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 C8BP07358 591 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 HOXB4P17483 251 aaPredicted RBP7.5□□□□□ -1.21
LDHA-223ENST00000545215 HOXA9P31269 272 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 ANAPC15P60006 121 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 PON2Q15165 354 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 CCDC96Q2M329 555 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 ARSHQ5FYA8 562 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 METTL7BQ6UX53 244 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 C6orf15Q6UXA7 325 aaPredicted RBP7.5□□□□□ -1.21
LDHA-223ENST00000545215 VITQ6UXI7 678 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 C20orf204Q6ZNR8 217 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 IL22RA1Q8N6P7 574 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 DAGLBQ8NCG7 672 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 RNF169Q8NCN4 708 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 CSGALNACT1Q8TDX6 532 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 THAP3Q8WTV1 239 aaPredicted RBP7.5□□□□□ -1.21
LDHA-223ENST00000545215 NUDT8Q8WV74 236 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 PLPPR2Q96GM1 343 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 MBOAT7Q96N66 472 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 CNNM2Q9H8M5 875 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 PXMP2Q9NR77 195 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 POLR3BQ9NW08 1133 aaPredicted RBP7.5□□□□□ -1.21
LDHA-223ENST00000545215 DNMT3BQ9UBC3 853 aaKnown RBP7.5□□□□□ -1.21
LDHA-223ENST00000545215 DNAJB4Q9UDY4 337 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
LDHA-223ENST00000545215 TELO2Q9Y4R8 837 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 PPME1Q9Y570 386 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 COL4A3BPQ9Y5P4 624 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 CORINQ9Y5Q5 1042 aa7.5□□□□□ -1.21
LDHA-223ENST00000545215 NIPBLQ6KC79 2804 aaeCLIP7.5□□□□□ -1.211e-10■□□□□ 8.1
LDHA-223ENST00000545215 NOTCH4Q99466 2003 aa7.49□□□□□ -1.21
LDHA-223ENST00000545215 PI4KAP42356 2102 aa7.49□□□□□ -1.21
LDHA-223ENST00000545215 PDCD11Q14690 1871 aaKnown RBP7.49□□□□□ -1.21
LDHA-223ENST00000545215 PCDH15Q96QU1 1955 aa7.49□□□□□ -1.21
LDHA-223ENST00000545215 ABCB11O95342 1321 aa7.49□□□□□ -1.21
LDHA-223ENST00000545215 WDR19Q8NEZ3 1342 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms