RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PAQR9Q6ZVX9 377 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 PPFIBP1Q86W92 1011 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 FMNL3Q8IVF7 1028 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 SLC22A17Q8WUG5 538 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 SYN2Q92777 582 aaPredicted RBP13.91□□□□□ -0.18
DDX11-227ENST00000544652 PCED1BQ96HM7 432 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 FUBP3Q96I24 572 aaKnown RBP eCLIP13.91□□□□□ -0.18
DDX11-227ENST00000544652 CDCA3Q99618 268 aaPredicted RBP13.91□□□□□ -0.18
DDX11-227ENST00000544652 LPIN3Q9BQK8 851 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 ZSWIM1Q9BR11 485 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 NSUN3Q9H649 340 aaKnown RBP13.91□□□□□ -0.18
DDX11-227ENST00000544652 AFF4Q9UHB7 1163 aaKnown RBP13.91□□□□□ -0.18
DDX11-227ENST00000544652 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
DDX11-227ENST00000544652 MTCH2Q9Y6C9 303 aa13.91□□□□□ -0.18
DDX11-227ENST00000544652 PRRC2BQ5JSZ5 2229 aaKnown RBP13.91□□□□□ -0.18
DDX11-227ENST00000544652 TGM5O43548 720 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 GFPT2O94808 682 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 FERP16591 822 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 KLRC2P26717 231 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 HNRNPH3P31942 346 aaKnown RBP13.9□□□□□ -0.18
DDX11-227ENST00000544652 CA8P35219 290 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 USP8P40818 1118 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 PRKCIP41743 596 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 BPIFB4P59827 614 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 PTK2Q05397 1052 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 MDH1BQ5I0G3 518 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 PPP1R26Q5T8A7 1209 aaPredicted RBP13.9□□□□□ -0.18
DDX11-227ENST00000544652 C4orf50Q6ZRC1 276 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 IRF2BP2Q7Z5L9 587 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 SLC47A2Q86VL8 602 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 FUKQ8N0W3 1084 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 C12orf29Q8N999 325 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 ZNF397Q8NF99 534 aaPredicted RBP13.9□□□□□ -0.18
DDX11-227ENST00000544652 SPPL2BQ8TCT7 592 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 CPLX3Q8WVH0 158 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 ZNF606Q8WXB4 792 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 TFAP2BQ92481 460 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 MYLPFQ96A32 169 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 CYFIP2Q96F07 1278 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 HEXIM2Q96MH2 286 aaKnown RBP13.9□□□□□ -0.18
DDX11-227ENST00000544652 HNRNPABQ99729 332 aaKnown RBP13.9□□□□□ -0.18
DDX11-227ENST00000544652 B3GNT5Q9BYG0 378 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 ABCB6Q9NP58 842 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 IMPACTQ9P2X3 320 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 FBXW11Q9UKB1 542 aa13.9□□□□□ -0.18
DDX11-227ENST00000544652 O00370 1275 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 MFAP3LO75121 409 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 CSPG5O95196 566 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 TPM1P09493 284 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 CYP11B1P15538 503 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 GNA15P30679 374 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 KRT9P35527 623 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 ARPP19P56211 112 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 STILQ15468 1287 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 CNGA2Q16280 664 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 MEA1Q16626 185 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 SFMBT2Q5VUG0 894 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 E4F1Q66K89 784 aaPredicted RBP13.89□□□□□ -0.19
DDX11-227ENST00000544652 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 TCEAL8Q8IYN2 117 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 EPS8L1Q8TE68 723 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 DDX1Q92499 740 aaKnown RBP13.89□□□□□ -0.19
DDX11-227ENST00000544652 PPP2R3CQ969Q6 453 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 FAM161BQ96MY7 647 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 DNAJC7Q99615 494 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 TLE6Q9H808 572 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 NOCTQ9UK39 431 aaKnown RBP13.89□□□□□ -0.19
DDX11-227ENST00000544652 PCDHGC3Q9UN70 934 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.89□□□□□ -0.19
DDX11-227ENST00000544652 PCDHB5Q9Y5E4 795 aa13.89□□□□□ -0.19
DDX11-227ENST00000544652 HELZP42694 1942 aaKnown RBP13.89□□□□□ -0.19
DDX11-227ENST00000544652 PER2O15055 1255 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 MED7O43513 233 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 PAPLNO95428 1278 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 SEC24AO95486 1093 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 GLUD1P00367 558 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 CALCAP01258 141 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 CCDC172P0C7W6 258 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 CCDC130P13994 396 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 CD19P15391 556 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 BRD2P25440 801 aaKnown RBP13.88□□□□□ -0.19
DDX11-227ENST00000544652 MAGEA11P43364 429 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 NRIP1P48552 1158 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 ADCY1Q08828 1119 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 HYAL1Q12794 435 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 PKDCCQ504Y2 493 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 LCLAT1Q6UWP7 414 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 VSTM1Q6UX27 236 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 TMEM184AQ6ZMB5 413 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 Q7L0L9 218 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 NOP9Q86U38 636 aaKnown RBP13.88□□□□□ -0.19
DDX11-227ENST00000544652 FAM35AQ86V20 835 aa13.88□□□□□ -0.19
DDX11-227ENST00000544652 ZNF677Q86XU0 584 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms