RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	KRT17	Q04695	432 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	FOXI1	Q12951	378 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	MPP3	Q13368	585 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	ZIK1	Q3SY52	487 aa	Predicted RBP	6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	PLA1A	Q53H76	456 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	ARHGAP40	Q5TG30	622 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	IL31	Q6EBC2	164 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	LAIR1	Q6GTX8	287 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	TOR1AIP2	Q8NFQ8	470 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	SPSB4	Q96A44	273 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	FAM136A	Q96C01	138 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	TBCB	Q99426	244 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	TTPAL	Q9BTX7	342 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	STK31	Q9BXU1	1019 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	UNK	Q9C0B0	810 aa	Known RBP	6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	PNPLA8	Q9NP80	782 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	TBC1D30	Q9Y2I9	924 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	hCG_1984214	I3L0E3	225 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	FOXN3	O00409	490 aa	Predicted RBP	6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	FOXN1	O15353	648 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	YY2	O15391	372 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	PEX1	O43933	1283 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	IL1R1	P14778	569 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	LRPAP1	P30533	357 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	PRIM2	P49643	509 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	CASP5	P51878	434 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	SATB1	Q01826	763 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	ITIH3	Q06033	890 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	FSTL1	Q12841	308 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	MYO1E	Q12965	1108 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	IFIT5	Q13325	482 aa	Known RBP	6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	DAG1	Q14118	895 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	MGAT5B	Q3V5L5	792 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	SFRP4	Q6FHJ7	346 aa	Predicted RBP	6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	RGS7BP	Q6MZT1	257 aa	Predicted RBP	6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	PARD3B	Q8TEW8	1205 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	STRBP	Q96SI9	672 aa	Known RBP	6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	NELL2	Q99435	816 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	KRTAP4-9	Q9BYQ8	210 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	SERHL	Q9NQF3	203 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	SERTAD3	Q9UJW9	196 aa		6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	NDRG4	Q9ULP0	352 aa	Known RBP	6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	MRPS17	Q9Y2R5	130 aa	Known RBP	6.42	□□□□□ -1.38
LEMD3-205	ENST00000544506	CCDC194	A0A1B0GVG4	234 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	PPM1D	O15297	605 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	RASSF9	O75901	435 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	IL18RAP	O95256	599 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	ESRRB	O95718	433 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	SLPI	P03973	132 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	RHO	P08100	348 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	PDHA1	P08559	390 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	MPL	P40238	635 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	FOLR3	P41439	243 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	NXPH1	P58417	271 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	ZNF543	Q08ER8	600 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	PICALM	Q13492	652 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	LONRF1	Q17RB8	773 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	ICE2	Q659A1	982 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	C11orf96	Q7Z7L8	435 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	LIX1L	Q8IVB5	337 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	FBXL20	Q96IG2	436 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	PGBD1	Q96JS3	809 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	PPP1R9B	Q96SB3	815 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	CXorf36	Q9H7Y0	433 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	CHST12	Q9NRB3	414 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	ZSCAN32	Q9NX65	697 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	SSX2IP	Q9Y2D8	614 aa		6.41	□□□□□ -1.38
LEMD3-205	ENST00000544506	AKAP8	O43823	692 aa	Known RBP	6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	PLIN1	O60240	522 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	CHRM2	P08172	466 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	TXN	P10599	105 aa	Known RBP	6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	TSHR	P16473	764 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	ADRA1B	P35368	520 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	CARS	P49589	748 aa	Known RBP	6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	DGKE	P52429	567 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	HTRA4	P83105	476 aa	Predicted RBP	6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	EIF2B5	Q13144	721 aa	Known RBP	6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	E2F2	Q14209	437 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	TXNRD1	Q16881	649 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	KIAA0895L	Q68EN5	471 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	UNC13D	Q70J99	1090 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	MRGPRG	Q86SM5	289 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	BPIFB1	Q8TDL5	484 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	SNX22	Q96L94	193 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	BRIP1	Q9BX63	1249 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	CHST8	Q9H2A9	424 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	TOR3A	Q9H497	397 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	MID2	Q9UJV3	735 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	ITGB1BP2	Q9UKP3	347 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	HDAC9	Q9UKV0	1011 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	PHTF1	Q9UMS5	762 aa		6.4	□□□□□ -1.38
LEMD3-205	ENST00000544506	ADGRA2	Q96PE1	1338 aa		6.4	□□□□□ -1.39
LEMD3-205	ENST00000544506	POM121B	A6NF01	834 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	VWC2L	B2RUY7	222 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506		H7C4K7	107 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	MPPED1	O15442	326 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	RAMP2	O60895	175 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	MT-ND5	P03915	603 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	CSF1R	P07333	972 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	PARP1	P09874	1014 aa	Known RBP	6.39	□□□□□ -1.39

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