RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 CPXM1Q96SM3 734 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 ELOVL4Q9GZR5 314 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 SMYD3Q9H7B4 428 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.65■□□□□ 0.58
SCARB1-208ENST00000544327 RBM47A0AV96 593 aaKnown RBP18.64■□□□□ 0.57
SCARB1-208ENST00000544327 GOLGA8SH3BPF8 625 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 DNM1LO00429 736 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 HMGCRP04035 888 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 ERBB2P04626 1255 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 LGALS2P05162 132 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 GSTA1P08263 222 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 P4HA1P13674 534 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 INSRRP14616 1297 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 PECAM1P16284 738 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-208ENST00000544327 IL1R2P27930 398 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 IFNAR2P48551 515 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 FBXW10Q5XX13 1052 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 CHADLQ6NUI6 762 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 ARMCX2Q7L311 632 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 CDR2LQ86X02 465 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-208ENST00000544327 EMID1Q96A84 441 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-208ENST00000544327 ZNF668Q96K58 619 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-208ENST00000544327 UBN1Q9NPG3 1134 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 TJP2Q9UDY2 1190 aa18.64■□□□□ 0.57
SCARB1-208ENST00000544327 FARP1Q9Y4F1 1045 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-208ENST00000544327 EVPLQ92817 2033 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 H0YHG0 523 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 SNX3O60493 162 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 MICAL2O94851 1124 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 ITGB3P05106 788 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 VDRP11473 427 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 ETS1P14921 441 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 KDELR1P24390 212 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 SCTRP47872 440 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 SLC18A1P54219 525 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 CDH8P55286 799 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 INCA1Q0VD86 236 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 MKRN3Q13064 507 aaKnown RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 SPRED3Q2MJR0 410 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 KIAA0319LQ8IZA0 1049 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 TTC39CQ8N584 583 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 CMASQ8NFW8 434 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 DYDC1Q8WWB3 177 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 PRCCQ92733 491 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 ZBTB10Q96DT7 871 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 TWNKQ96RR1 684 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 RASSF9O75901 435 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 DNAJC8O75937 253 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 ITGBL1O95965 494 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 GCAP28676 217 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 HNRNPH1P31943 449 aaKnown RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 MPP2Q14168 576 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 TAPT1Q6NXT6 567 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 PPP1R21Q6ZMI0 780 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 ARHGEF18Q6ZSZ5 1173 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 MOB2Q70IA6 237 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 CENPUQ71F23 418 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 NT5DC4Q86YG4 428 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 ACSF2Q96CM8 615 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 ELAC2Q9BQ52 826 aaKnown RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 VTA1Q9NP79 307 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 METTL5Q9NRN9 209 aaKnown RBP18.63■□□□□ 0.57
SCARB1-208ENST00000544327 C2CD2Q9Y426 696 aa18.63■□□□□ 0.57
SCARB1-208ENST00000544327 A0A087WZ62 844 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 SGK1O00141 431 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 SMAPO00193 183 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 GH1P01241 217 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 PCK1P35558 622 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 GPD2P43304 727 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 OTUD4Q01804 1114 aaKnown RBP18.62■□□□□ 0.57
SCARB1-208ENST00000544327 MYO1EQ12965 1108 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 SLC10A6Q3KNW5 377 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 ZNF792Q3KQV3 632 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 MAMDC4Q6UXC1 1216 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 PPTC7Q8NI37 304 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 ACTL9Q8TC94 416 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 FDXACB1Q9BRP7 624 aaPredicted RBP18.62■□□□□ 0.57
SCARB1-208ENST00000544327 TMEM121Q9BTD3 319 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 KCNK9Q9NPC2 374 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 FETUBQ9UGM5 382 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 HMGXB4Q9UGU5 601 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 ITGA11Q9UKX5 1188 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 KIAA1257Q9ULG3 409 aa18.62■□□□□ 0.57
SCARB1-208ENST00000544327 TMEM132DQ14C87 1099 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 LRRC14Q15048 493 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 CYP4F22Q6NT55 531 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 TRABD2AQ86V40 505 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 ZC3H15Q8WU90 426 aaKnown RBP18.61■□□□□ 0.57
SCARB1-208ENST00000544327 HAUS1Q96CS2 278 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 SGSM3Q96HU1 749 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 MAGEB18Q96M61 343 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 ZWILCHQ9H900 591 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 NKIRAS1Q9NYS0 192 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 SENP1Q9P0U3 644 aa18.61■□□□□ 0.57
SCARB1-208ENST00000544327 USP15Q9Y4E8 981 aaPredicted RBP18.61■□□□□ 0.57
SCARB1-208ENST00000544327 EXOC1LA0A1B0GW35 172 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 TCP11X1B4DZS4 312 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 CST8O60676 142 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 ARF4P18085 180 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms