RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 RBM43Q6ZSC3 357 aaKnown RBP23.23■■□□□ 1.31
OTUB1-212ENST00000543988 TRIM59Q8IWR1 403 aa23.23■■□□□ 1.31
OTUB1-212ENST00000543988 MCRS1Q96EZ8 462 aa23.23■■□□□ 1.31
OTUB1-212ENST00000543988 C11orf16Q9NQ32 467 aa23.23■■□□□ 1.31
OTUB1-212ENST00000543988 GDE1Q9NZC3 331 aa23.23■■□□□ 1.31
OTUB1-212ENST00000543988 IGSF9Q9P2J2 1179 aa23.23■■□□□ 1.31
OTUB1-212ENST00000543988 MAGEC2Q9UBF1 373 aaPredicted RBP23.23■■□□□ 1.31
OTUB1-212ENST00000543988 COQ4Q9Y3A0 265 aa23.23■■□□□ 1.31
OTUB1-212ENST00000543988 DOCK8Q8NF50 2099 aa23.23■■□□□ 1.31
OTUB1-212ENST00000543988 FAM86C2PA6NEL3 165 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 MICAL2O94851 1124 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 BDNFP23560 247 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 FMO5P49326 533 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 NDST1P52848 882 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 MARSP56192 900 aaKnown RBP23.22■■□□□ 1.31
OTUB1-212ENST00000543988 RPL10AP62906 217 aaKnown RBP23.22■■□□□ 1.31
OTUB1-212ENST00000543988 INCA1Q0VD86 236 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 MTMR3Q13615 1198 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 TEAD2Q15562 447 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 PARM1Q6UWI2 310 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 SCN4BQ8IWT1 228 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 EDAQ92838 391 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 ZNF518BQ9C0D4 1074 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 CYP3A43Q9HB55 503 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 NUMBLQ9Y6R0 609 aa23.22■■□□□ 1.31
OTUB1-212ENST00000543988 A0A1W2PRU2 124 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 FGFR1OPO95684 399 aaKnown RBP23.21■■□□□ 1.31
OTUB1-212ENST00000543988 HMGA1P17096 107 aaKnown RBP23.21■■□□□ 1.31
OTUB1-212ENST00000543988 CD58P19256 250 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 GAREM2Q75VX8 874 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 ACOT1Q86TX2 421 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 FGF14Q92915 247 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 TNIP3Q96KP6 325 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 TWNKQ96RR1 684 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 ARID3AQ99856 593 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 B3GNT5Q9BYG0 378 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 IL21Q9HBE4 155 aa23.21■■□□□ 1.31
OTUB1-212ENST00000543988 CLDN5O00501 218 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 GABRR2P28476 465 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 CACNA2D1P54289 1103 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 TDGQ13569 410 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 TAF12Q16514 161 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 WDR44Q5JSH3 913 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 VSTM1Q6UX27 236 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 UNC93AQ86WB7 457 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 TATDN2Q93075 761 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 CNOT6LQ96LI5 555 aaKnown RBP23.2■■□□□ 1.3
OTUB1-212ENST00000543988 ZSWIM3Q96MP5 696 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 C1QTNF1Q9BXJ1 281 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 ELOVL4Q9GZR5 314 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 TMEM30AQ9NV96 361 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 DACH1Q9UI36 760 aa23.2■■□□□ 1.3
OTUB1-212ENST00000543988 CCDC192P0DO97 292 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 FAM78AQ5JUQ0 283 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 STXBP5Q5T5C0 1151 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 MTSS1LQ765P7 747 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 IRF2BP1Q8IU81 584 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 UBALD2Q8IYN6 164 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 NXPE3Q969Y0 559 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 KXD1Q9BQD3 176 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 RPP25Q9BUL9 199 aaKnown RBP23.19■■□□□ 1.3
OTUB1-212ENST00000543988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.19■■□□□ 1.3
OTUB1-212ENST00000543988 TRIOO75962 3097 aa23.19■■□□□ 1.3
OTUB1-212ENST00000543988 SLC38A8A6NNN8 435 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 PMM2O15305 246 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 NARSO43776 548 aaKnown RBP23.18■■□□□ 1.3
OTUB1-212ENST00000543988 CILPO75339 1184 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 NOL4O94818 638 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 FGF19O95750 216 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 CSH1P0DML2 217 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 CSH2P0DML3 217 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 CCDC130P13994 396 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 FCARP24071 287 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 ERCC5P28715 1186 aaPredicted RBP23.18■■□□□ 1.3
OTUB1-212ENST00000543988 GRIK1P39086 918 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 CCDC183Q5T5S1 534 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 TRIM67Q6ZTA4 783 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 FAM35AQ86V20 835 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 CRYBG2Q8N1P7 616 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 SLC44A3Q8N4M1 653 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 WHAMMQ8TF30 809 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 FAXDC2Q96IV6 333 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 ATXN3LQ9H3M9 355 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 SLITRK6Q9H5Y7 841 aa23.18■■□□□ 1.3
OTUB1-212ENST00000543988 MAGED2Q9UNF1 606 aaPredicted RBP23.18■■□□□ 1.3
OTUB1-212ENST00000543988 F8VP50 259 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 AFPP02771 609 aaKnown RBP23.17■■□□□ 1.3
OTUB1-212ENST00000543988 CYP4F8P98187 520 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 KCNH2Q12809 1159 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 LRMPQ12912 555 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 PAQR9Q6ZVX9 377 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 TMEM150AQ86TG1 271 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 FUKQ8N0W3 1084 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 SPATA17Q96L03 361 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 ASB16Q96NS5 453 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 GCNAQ96QF7 691 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 MED10Q9BTT4 135 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 NT5C1AQ9BXI3 368 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 KRT82Q9NSB4 513 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 CISHQ9NSE2 258 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms