RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 ACSF2Q96CM8 615 aaPredicted RBP13.15□□□□□ -0.3
SMCR5-201ENST00000543475 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
SMCR5-201ENST00000543475 PANX3Q96QZ0 392 aa13.15□□□□□ -0.3
SMCR5-201ENST00000543475 THTPAQ9BU02 230 aa13.15□□□□□ -0.3
SMCR5-201ENST00000543475 ZC3H12CQ9C0D7 883 aaKnown RBP13.15□□□□□ -0.3
SMCR5-201ENST00000543475 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
SMCR5-201ENST00000543475 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
SMCR5-201ENST00000543475 PPARGC1AQ9UBK2 798 aaKnown RBP13.15□□□□□ -0.3
SMCR5-201ENST00000543475 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
SMCR5-201ENST00000543475 IQANK1A0A1B0GTG1 560 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 CREB3O43889 395 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 ZC3H11AO75152 810 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 DHRS4L1P0CG22 281 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 QARSP47897 775 aaKnown RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 CDK7P50613 346 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 MCCD1P59942 119 aaPredicted RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 RPL7AP62424 266 aaKnown RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 NOMO3P69849 1222 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 KDSRQ06136 332 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 C1orf146Q5VVC0 180 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 ANKRD22Q5VYY1 191 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 ST13P4Q8IZP2 240 aaPredicted RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 VCPIP1Q96JH7 1222 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 MXRA8Q9BRK3 442 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 TTC36A6NLP5 189 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 CRABP2P29373 138 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 ETV4P43268 484 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 RBM5P52756 815 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 CDC16Q13042 620 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 PTK7Q13308 1070 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 TFDP3Q5H9I0 405 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 FAM91A1Q658Y4 838 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 TRIM72Q6ZMU5 477 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 MYLK4Q86YV6 388 aaPredicted RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 ULK2Q8IYT8 1036 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 OLFM3Q96PB7 478 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 IQCGQ9H095 443 aaKnown RBP13.14□□□□□ -0.31
SMCR5-201ENST00000543475 IL1RAPL1Q9NZN1 696 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 QSER1Q2KHR3 1735 aa13.14□□□□□ -0.31
SMCR5-201ENST00000543475 SPECC1L-ADORA2AF8WAN1 911 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 TM7SF2O76062 418 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 USP1O94782 785 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 ECE1P42892 770 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 ACTR3P61158 418 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 BRDTQ58F21 947 aaPredicted RBP13.13□□□□□ -0.31
SMCR5-201ENST00000543475 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 SH3BP5LQ7L8J4 393 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 TREML1Q86YW5 311 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 TMEM161BQ8NDZ6 487 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 CPT1BQ92523 772 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 NCSTNQ92542 709 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 KCNH7Q9NS40 1196 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 POLIQ9UNA4 740 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 hCG_1818297A0A087WSY0 165 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 G3V3G9 751 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 I3L4J1 428 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 PYGBP11216 843 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 ETS2P15036 469 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 ITGB5P18084 799 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 GNA15P30679 374 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
SMCR5-201ENST00000543475 MARK2Q7KZI7 788 aaKnown RBP13.13□□□□□ -0.31
SMCR5-201ENST00000543475 PHF13Q86YI8 300 aaPredicted RBP13.13□□□□□ -0.31
SMCR5-201ENST00000543475 MAP4K3Q8IVH8 894 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 ABRAQ8N0Z2 381 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMCR5-201ENST00000543475 FAM210AQ96ND0 272 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 C10orf88Q9H8K7 445 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 KCNK4Q9NYG8 393 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 DNAJB4Q9UDY4 337 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 SLC7A8Q9UHI5 535 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
SMCR5-201ENST00000543475 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
SMCR5-201ENST00000543475 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 E5RJQ4 531 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 OPHN1O60890 802 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 RNASEH1O60930 286 aaKnown RBP13.12□□□□□ -0.31
SMCR5-201ENST00000543475 NPTX2P47972 431 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 DYNLT1P63172 113 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
SMCR5-201ENST00000543475 DMP1Q13316 513 aaPredicted RBP13.12□□□□□ -0.31
SMCR5-201ENST00000543475 TMEM270Q6UE05 265 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 SLC25A41Q8N5S1 370 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 MTBPQ96DY7 904 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 FAM213AQ9BRX8 229 aa13.12□□□□□ -0.31
SMCR5-201ENST00000543475 WDR83Q9BRX9 315 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms