RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 GRXCR1A8MXD5 290 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 CLDN5O00501 218 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 KRT86O43790 486 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 FGF18O76093 207 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 SOD2P04179 222 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 LINC00271P0C7V0 271 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 ABCB4P21439 1286 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 CTNNB1P35222 781 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 BCAT1P54687 386 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 SLC8A3P57103 927 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 PLCB3Q01970 1234 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 CCDC142Q17RM4 750 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 ZNF662Q6ZS27 426 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 TTC30AQ86WT1 665 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 PHF13Q86YI8 300 aaPredicted RBP11.3□□□□□ -0.6
DDB1-221ENST00000543162 RNF168Q8IYW5 571 aaPredicted RBP11.3□□□□□ -0.6
DDB1-221ENST00000543162 FUKQ8N0W3 1084 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 WDTC1Q8N5D0 677 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 ANKRD52Q8NB46 1076 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 MSANTD4Q8NCY6 345 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 ATRIPQ8WXE1 791 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 CTNNBL1Q8WYA6 563 aaPredicted RBP11.3□□□□□ -0.6
DDB1-221ENST00000543162 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
DDB1-221ENST00000543162 PIK3R5Q8WYR1 880 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 SECISBP2LQ93073 1101 aaKnown RBP11.3□□□□□ -0.6
DDB1-221ENST00000543162 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 TRIM11Q96F44 468 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 PCED1BQ96HM7 432 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 NOX5Q96PH1 765 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 TMEM209Q96SK2 561 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 B3GNT5Q9BYG0 378 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 LACRTQ9GZZ8 138 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 CHST7Q9NS84 486 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 TFR2Q9UP52 801 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 RWDD3Q9Y3V2 267 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 LINC01553A4QN01 128 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 C2CD2LO14523 706 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 PJA2O43164 708 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 CALB1P05937 261 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 URODP06132 367 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 OR4Q2P0C623 313 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 FAM200BP0CF97 657 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 MYBL1P10243 752 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 MYOGP15173 224 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 MMP8P22894 467 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 BMPR1AP36894 532 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 GPD2P43304 727 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 GLUD2P49448 558 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 CDR1P51861 262 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 GPC5P78333 572 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 DSG1Q02413 1049 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
DDB1-221ENST00000543162 PDE4CQ08493 712 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 BST2Q10589 180 aaKnown RBP11.29□□□□□ -0.6
DDB1-221ENST00000543162 PSMD5Q16401 504 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 NFE2Q16621 373 aaPredicted RBP11.29□□□□□ -0.6
DDB1-221ENST00000543162 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 PKDCCQ504Y2 493 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 LIN9Q5TKA1 542 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 FAM109BQ6ICB4 259 aaPredicted RBP11.29□□□□□ -0.6
DDB1-221ENST00000543162 PRSS55Q6UWB4 352 aaPredicted RBP11.29□□□□□ -0.6
DDB1-221ENST00000543162 C4orf50Q6ZRC1 276 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 MMS22LQ6ZRQ5 1243 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 PAQR9Q6ZVX9 377 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 MON1BQ7L1V2 547 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 FAM35AQ86V20 835 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 ERICH1Q86X53 443 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 SPATA2LQ8IUW3 424 aaPredicted RBP11.29□□□□□ -0.6
DDB1-221ENST00000543162 MCOLN2Q8IZK6 566 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 VPS52Q8N1B4 723 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 KLHL23Q8NBE8 558 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 SMARCD1Q96GM5 515 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 C11orf70Q9BRQ4 267 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 PLVAPQ9BX97 442 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 DUSP16Q9BY84 665 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 THAP2Q9H0W7 228 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 SYNCQ9H7C4 482 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 TMLHEQ9NVH6 421 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 ADAM22Q9P0K1 906 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 MTRRQ9UBK8 725 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 TRIM10Q9UDY6 481 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
DDB1-221ENST00000543162 TBC1D4O60343 1298 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 CAPN15O75808 1086 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 AP1G2O75843 785 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 CPB1P15086 417 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 NPR3P17342 541 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 ARPP19P56211 112 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms