RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 UBA3Q8TBC4 463 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 SLC35F5Q8WV83 523 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 TSC1Q92574 1164 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 MS4A14Q96JA4 679 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 BTBD6Q96KE9 485 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 CPXM1Q96SM3 734 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 HNRNPABQ99729 332 aaKnown RBP16.82■□□□□ 0.28
USP5-207ENST00000542371 PLVAPQ9BX97 442 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 SLC4A5Q9BY07 1137 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 DPEP3Q9H4B8 488 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
USP5-207ENST00000542371 PCDHB7Q9Y5E2 793 aa16.82■□□□□ 0.28
USP5-207ENST00000542371 B3GAT3O94766 335 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 ERBB2P04626 1255 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 KRT3P12035 628 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 PTPN1P18031 435 aaKnown RBP16.81■□□□□ 0.28
USP5-207ENST00000542371 TYMPP19971 482 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 RFC2P35250 354 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 ACADSBP45954 432 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 RPL34P49207 117 aaKnown RBP16.81■□□□□ 0.28
USP5-207ENST00000542371 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
USP5-207ENST00000542371 RWDD2BP57060 319 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 TLE2Q04725 743 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 ACAP1Q15027 740 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 TRIM60Q495X7 471 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 TIGD5Q53EQ6 642 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 GLE1Q53GS7 698 aaKnown RBP16.81■□□□□ 0.28
USP5-207ENST00000542371 CLLU1OSQ5K130 101 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 PHLDB2Q86SQ0 1253 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 TMEM110Q86TL2 294 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 TTC30AQ86WT1 665 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 C3orf58Q8NDZ4 430 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 HSFY1Q96LI6 401 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 FAM49BQ9NUQ9 324 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 DDX43Q9NXZ2 648 aaKnown RBP16.81■□□□□ 0.28
USP5-207ENST00000542371 TMEM59LQ9UK28 342 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 CDH9Q9ULB4 789 aa16.81■□□□□ 0.28
USP5-207ENST00000542371 TARSL2A2RTX5 802 aaKnown RBP16.8■□□□□ 0.28
USP5-207ENST00000542371 CCDC188H7C350 402 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 PSTPIP1O43586 416 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 PCSK1P29120 753 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 SCNN1AP37088 669 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 SLC8A3P57103 927 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 PPP2R5EQ16537 467 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 PTPROQ16827 1216 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 CYP4A22Q5TCH4 519 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 SEL1L2Q5TEA6 688 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 LRRC38Q5VT99 294 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 CD300LGQ6UXG3 332 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 RHOT1Q8IXI2 618 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 NOA1Q8NC60 698 aaKnown RBP16.8■□□□□ 0.28
USP5-207ENST00000542371 RUBCNQ92622 972 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 SUSD3Q96L08 255 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 FAM193BQ96PV7 902 aaPredicted RBP16.8■□□□□ 0.28
USP5-207ENST00000542371 TRIM7Q9C029 511 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 TBX21Q9UL17 535 aa16.8■□□□□ 0.28
USP5-207ENST00000542371 IBSPP21815 317 aaPredicted RBP16.79■□□□□ 0.28
USP5-207ENST00000542371 MCM3P25205 808 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 CTCFP49711 727 aaPredicted RBP16.79■□□□□ 0.28
USP5-207ENST00000542371 RPL7AP62424 266 aaKnown RBP16.79■□□□□ 0.28
USP5-207ENST00000542371 PLCB3Q01970 1234 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 PDE4CQ08493 712 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 C2orf54Q08AI8 447 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 DCAF12L1Q5VU92 463 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 COLGALT2Q8IYK4 626 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 ABI1Q8IZP0 508 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 ALG3Q92685 438 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 KRT35Q92764 455 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 RNPC3Q96LT9 517 aaKnown RBP16.79■□□□□ 0.28
USP5-207ENST00000542371 MCEEQ96PE7 176 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 SYT15Q9BQS2 421 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 ACBD6Q9BR61 282 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 PAAF1Q9BRP4 392 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 C11orf49Q9H6J7 331 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 TBC1D13Q9NVG8 400 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 ARGLU1Q9NWB6 273 aaPredicted RBP16.79■□□□□ 0.28
USP5-207ENST00000542371 EHD2Q9NZN4 543 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 LRFN2Q9ULH4 789 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 PCDHB8Q9UN66 801 aa16.79■□□□□ 0.28
USP5-207ENST00000542371 GOLGA8SH3BPF8 625 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 XPO1O14980 1071 aaKnown RBP16.78■□□□□ 0.28
USP5-207ENST00000542371 DDHD2O94830 711 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 CCDC130P13994 396 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 IGFBP6P24592 240 aaPredicted RBP16.78■□□□□ 0.28
USP5-207ENST00000542371 PLA2G4AP47712 749 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 PMF1Q6P1K2 205 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 ARCQ7LC44 396 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 NPAS4Q8IUM7 802 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 CRIPAKQ8N1N5 446 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 THEM5Q8N1Q8 247 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 NCAPGQ9BPX3 1015 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 DUSP16Q9BY84 665 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 MRPL9Q9BYD2 267 aaKnown RBP16.78■□□□□ 0.28
USP5-207ENST00000542371 UBXN6Q9BZV1 441 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 ANKZF1Q9H8Y5 726 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 ST7Q9NRC1 585 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
USP5-207ENST00000542371 RAB21Q9UL25 225 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms