RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	RNPC3	Q96LT9	517 aa	Known RBP	12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	ZNF558	Q96NG5	402 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	ARHGAP39	Q9C0H5	1083 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	TRPC7	Q9HCX4	862 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	TJP2	Q9UDY2	1190 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	ADCY6	O43306	1168 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	MME	P08473	750 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	VSNL1	P62760	191 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	ZACN	Q401N2	412 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	MFSD14A	Q96MC6	490 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	AMACR	Q9UHK6	382 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	IPP	Q9Y573	584 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	HEY1	Q9Y5J3	304 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	ATG7	O95352	703 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	PLEK	P08567	350 aa	Predicted RBP	12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	PAEP	P09466	180 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	GPD1	P21695	349 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	DLG4	P78352	724 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	GRIK3	Q13003	919 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	MDH1B	Q5I0G3	518 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	ARHGEF19	Q8IW93	802 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	HELQ	Q8TDG4	1101 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	PYROXD1	Q8WU10	500 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	DERA	Q9Y315	318 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	DNAJC25-GNG10	A0A024R161	153 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	FRMD3	A2A2Y4	597 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	GRID2IP	A4D2P6	1211 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	GRAP2	O75791	330 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	KRT10	P13645	584 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	PURA	Q00577	322 aa	Known RBP	12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	CENPU	Q71F23	418 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	PPP4R1	Q8TF05	950 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	LPP	Q93052	612 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	MS4A14	Q96JA4	679 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	LRRC1	Q9BTT6	524 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	NXF3	Q9H4D5	531 aa	Known RBP	12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	AIPL1	Q9NZN9	384 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	HPCAL4	Q9UM19	191 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	PCDHB5	Q9Y5E4	795 aa		12.99	□□□□□ -0.33
ABCB8-222	ENST00000542328	TSPAN1	O60635	241 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	GHRHR	Q02643	423 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	DCAF6	Q58WW2	860 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	RNF219	Q5W0B1	726 aa	Predicted RBP	12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	ZBTB10	Q96DT7	871 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	FGFBP2	Q9BYJ0	223 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	BAIAP2L1	Q9UHR4	511 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	CAPN7	Q9Y6W3	813 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	FBXO21	O94952	628 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	MBTD1	Q05BQ5	628 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	BST2	Q10589	180 aa	Known RBP	12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	DRP2	Q13474	957 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	ZNF606	Q8WXB4	792 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	SCYL1	Q96KG9	808 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	TRMT13	Q9NUP7	481 aa	Known RBP	12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	ADAM21	Q9UKJ8	722 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	CHRNA3	P32297	505 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	LIG3	P49916	1009 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	CDH8	P55286	799 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	IFT88	Q13099	833 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	MORN1	Q5T089	497 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	NYAP1	Q6ZVC0	841 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	UNC93A	Q86WB7	457 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	LRRC52	Q8N7C0	313 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	GPATCH11	Q8N954	259 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	TRPV6	Q9H1D0	765 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	SAYSD1	Q9NPB0	183 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	KRT82	Q9NSB4	513 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	ARAP2	Q8WZ64	1704 aa		12.98	□□□□□ -0.33
ABCB8-222	ENST00000542328	DNAJB2	P25686	324 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	SERPINB6	P35237	376 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	REXO1L1P	Q8IX06	675 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	PDZD7	Q9H5P4	517 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	STK38L	Q9Y2H1	464 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	B4GALT4	O60513	344 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	MT-ND3	P03897	115 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	CYBB	P04839	570 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	TLE2	Q04725	743 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	ARHGAP15	Q53QZ3	475 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	CYP4A22	Q5TCH4	519 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	CCDC137	Q6PK04	289 aa	Known RBP	12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	SLC47A2	Q86VL8	602 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	YAF2	Q8IY57	180 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	FIBCD1	Q8N539	461 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	OR5B17	Q8NGF7	314 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	C1orf54	Q8WWF1	131 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	RIN2	Q8WYP3	895 aa	Predicted RBP	12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	FBXO32	Q969P5	355 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	UNC93B1	Q9H1C4	597 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	FZD8	Q9H461	694 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	C11orf49	Q9H6J7	331 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	METTL5	Q9NRN9	209 aa	Known RBP	12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	PFDN6	O15212	129 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	NCAM1	P13591	858 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	ACAT1	P24752	427 aa	Known RBP	12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	GGCX	P38435	758 aa		12.97	□□□□□ -0.33
ABCB8-222	ENST00000542328	GARS	P41250	739 aa	Known RBP	12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms