RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 TNIP3Q96KP6 325 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 CASD1Q96PB1 797 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 NAPGQ99747 312 aaPredicted RBP9.8□□□□□ -0.84
LDHA-220ENST00000542179 PAAF1Q9BRP4 392 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 TUBB2BQ9BVA1 445 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 MRPL9Q9BYD2 267 aaKnown RBP9.8□□□□□ -0.84
LDHA-220ENST00000542179 SNX25Q9H3E2 840 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 UVRAGQ9P2Y5 699 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 DSEQ9UL01 958 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.8□□□□□ -0.84
LDHA-220ENST00000542179 JRKLQ9Y4A0 524 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 CEP83Q9Y592 693 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 CAPN6Q9Y6Q1 641 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 TTC3P53804 2025 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 SCN5AQ14524 2016 aa9.8□□□□□ -0.84
LDHA-220ENST00000542179 BUB1O43683 1085 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 MICAL2O94851 1124 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 CALB1P05937 261 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 RAG1P15918 1043 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 PRLRP16471 622 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 TYMPP19971 482 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 IGFBP6P24592 240 aaPredicted RBP9.79□□□□□ -0.84
LDHA-220ENST00000542179 LMO2P25791 158 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 ITGB8P26012 769 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 GPD2P43304 727 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 NOP2P46087 812 aaKnown RBP9.79□□□□□ -0.84
LDHA-220ENST00000542179 NAP1L1P55209 391 aaKnown RBP9.79□□□□□ -0.84
LDHA-220ENST00000542179 PTP4A2Q12974 167 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 PKDCCQ504Y2 493 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 PAPD7Q5XG87 772 aaKnown RBP9.79□□□□□ -0.84
LDHA-220ENST00000542179 WSCD1Q658N2 575 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 DENND1BQ6P3S1 775 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 DSTYKQ6XUX3 929 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 DEFB128Q7Z7B8 93 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 ACOT1Q86TX2 421 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 OSTM1Q86WC4 334 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 DNAAF5Q86Y56 855 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 ZNF280BQ86YH2 543 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 SYCE1Q8N0S2 351 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 TMEM199Q8N511 208 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 LRRC57Q8N9N7 239 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 TPCN2Q8NHX9 752 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 CPA5Q8WXQ8 436 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 ARHGEF26Q96DR7 871 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 SUSD3Q96L08 255 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 FAM193BQ96PV7 902 aaPredicted RBP9.79□□□□□ -0.84
LDHA-220ENST00000542179 TMEM175Q9BSA9 504 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 L2HGDHQ9H9P8 463 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 ADAM22Q9P0K1 906 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 COG5Q9UP83 839 aa9.79□□□□□ -0.84
LDHA-220ENST00000542179 LTBP2Q14767 1821 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 GRID2IPA4D2P6 1211 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 B4GALT3O60512 393 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 PALMO75781 387 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 DGKIO75912 1065 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 ALDH2P05091 517 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 ODC1P11926 461 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 EN2P19622 333 aaPredicted RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 IBSPP21815 317 aaPredicted RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 GABRB2P47870 512 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 GSCP56915 257 aaPredicted RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 RNASELQ05823 741 aaKnown RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 ORC1Q13415 861 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 PPP1R26Q5T8A7 1209 aaPredicted RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 LIN9Q5TKA1 542 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 PLEKHA7Q6IQ23 1121 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.78□□□□□ -0.843e-10■■■□□ 16.2
LDHA-220ENST00000542179 ERICH1Q86X53 443 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 METTL23Q86XA0 190 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 PASD1Q8IV76 773 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 C12orf29Q8N999 325 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 TET1Q8NFU7 2136 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 STK32AQ8WU08 396 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 TOP1MTQ969P6 601 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 ZNF653Q96CK0 615 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 NRDE2Q9H7Z3 1164 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 MRPL47Q9HD33 250 aaKnown RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 OSGEPQ9NPF4 335 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 DDX43Q9NXZ2 648 aaKnown RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 CTTNBP2NLQ9P2B4 639 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 CACNG4Q9UBN1 327 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 CNOT8Q9UFF9 292 aaKnown RBP9.78□□□□□ -0.84
LDHA-220ENST00000542179 TSPAN16Q9UKR8 245 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 STRIP2Q9ULQ0 834 aa9.78□□□□□ -0.84
LDHA-220ENST00000542179 A0A0C4DFX4 3053 aa9.77□□□□□ -0.84
LDHA-220ENST00000542179 MICAL3Q7RTP6 2002 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 TCRBV5S1A1TA0A578 114 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 TRAPPC3O43617 180 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 OAZ2O95190 189 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 KIF4AO95239 1232 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 AMHP03971 560 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 PDGFRBP09619 1106 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 CSF2RAP15509 400 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 PTPN1P18031 435 aaKnown RBP9.77□□□□□ -0.85
LDHA-220ENST00000542179 RRM1P23921 792 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 BRCC3P46736 316 aa9.77□□□□□ -0.85
LDHA-220ENST00000542179 RPL34P49207 117 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms