RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 EXD1Q8NHP7 514 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 MFSD14AQ96MC6 490 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 PAFAH2Q99487 392 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 AVENQ9NQS1 362 aaPredicted RBP16.09■□□□□ 0.17
CNOT9-208ENST00000542068 SPATS2LQ9NUQ6 558 aaKnown RBP16.09■□□□□ 0.17
CNOT9-208ENST00000542068 SYNPO2Q9UMS6 1093 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 NUB1Q9Y5A7 615 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 CLGNO14967 610 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 SIPA1L1O43166 1804 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 PSTPIP1O43586 416 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 HAUS5O94927 633 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.17
CNOT9-208ENST00000542068 KCNA2P16389 499 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 BGNP21810 368 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 BAG6P46379 1132 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 CUL2Q13617 745 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 XKR3Q5GH77 459 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 SPOCD1Q6ZMY3 1216 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 KATNAL2Q8IYT4 538 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 ABRAQ8N0Z2 381 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 RNF149Q8NC42 400 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 ZNF483Q8TF39 744 aaPredicted RBP16.08■□□□□ 0.17
CNOT9-208ENST00000542068 FAM81BQ96LP2 452 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 SENP7Q9BQF6 1050 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 CADM1Q9BY67 442 aaKnown RBP16.08■□□□□ 0.17
CNOT9-208ENST00000542068 ZCWPW1Q9H0M4 648 aa16.08■□□□□ 0.17
CNOT9-208ENST00000542068 SMG5Q9UPR3 1016 aaKnown RBP16.08■□□□□ 0.17
CNOT9-208ENST00000542068 CAPN9O14815 690 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 YWHAGP61981 247 aaKnown RBP eCLIP16.08■□□□□ 0.16
CNOT9-208ENST00000542068 GCNT1Q02742 428 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 LY6KQ17RY6 165 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 WDR72Q3MJ13 1102 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 FKBP1CQ5VVH2 108 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 RSAD2Q8WXG1 361 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 CYTH2Q99418 400 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 EURLQ9NYK6 297 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 TJP2Q9UDY2 1190 aa16.08■□□□□ 0.16
CNOT9-208ENST00000542068 DKC1O60832 514 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ARFIP2P53365 341 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 RNF220Q5VTB9 566 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 EMC1Q8N766 993 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ACTL9Q8TC94 416 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 PPP1R13LQ8WUF5 828 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 TRIM11Q96F44 468 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 DDX50Q9BQ39 737 aaKnown RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 CORO1CQ9ULV4 474 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 IKBKGQ9Y6K9 419 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ATP5HO75947 161 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 FAM155BO75949 473 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 CST3P01034 146 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 MT-ND3P03897 115 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 PTPN4P29074 926 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 SKIV2L2P42285 1042 aaKnown RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 HIRAP54198 1017 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 BIRC2Q13490 618 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ALLCQ8N6M5 410 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 PDCD7Q8N8D1 485 aaKnown RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 FAM71DQ8N9W8 422 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 MANSC1Q9H8J5 431 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ZNF395Q9H8N7 513 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 PARVAQ9NVD7 372 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 NMRK1Q9NWW6 199 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 CLUHO75153 1309 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ZNF541Q9H0D2 1346 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 NVLO15381 856 aaKnown RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 EXTL3O43909 919 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 CST8O60676 142 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 PLA2G6O60733 806 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 VNN1O95497 513 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 POLE2P56282 527 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 GEMIN4P57678 1058 aaKnown RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 OTUD4Q01804 1114 aaKnown RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 TAS1R3Q7RTX0 852 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 CEP120Q8N960 986 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 PRPF31Q8WWY3 499 aaKnown RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ZNF606Q8WXB4 792 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 ZNF214Q9UL59 606 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-208ENST00000542068 FOCADQ5VW36 1801 aa16.07■□□□□ 0.16
CNOT9-208ENST00000542068 AVILO75366 819 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 BAG2O95816 211 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CYP1A1P04798 512 aaPredicted RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CD48P09326 243 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 ESRRAP11474 423 aaPredicted RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 BPIFB4P59827 614 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CCDC15Q0P6D6 951 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 FAXCQ5TGI0 409 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 WDR60Q8WVS4 1066 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 HSPH1Q92598 858 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 STMN2Q93045 179 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 GPRASP2Q96D09 838 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CFAP36Q96G28 342 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 TSC22D3Q99576 134 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 MECRQ9BV79 373 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms