RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SPATA2LQ8IUW3 424 aaPredicted RBP13.99□□□□□ -0.17
LTBR-208ENST00000541005 B3GALNT2Q8NCR0 500 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 OR6B3Q8NGW1 331 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 RSAD2Q8WXG1 361 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 SLC35C1Q96A29 364 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 TRMT2BQ96GJ1 504 aaKnown RBP13.99□□□□□ -0.17
LTBR-208ENST00000541005 PCED1BQ96HM7 432 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 IMPG2Q9BZV3 1241 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 GPR88Q9GZN0 384 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 SDCBP2Q9H190 292 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 TRPV4Q9HBA0 871 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 IL21Q9HBE4 155 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 APOBEC3GQ9HC16 384 aaKnown RBP13.99□□□□□ -0.17
LTBR-208ENST00000541005 METTL14Q9HCE5 456 aaKnown RBP13.99□□□□□ -0.17
LTBR-208ENST00000541005 SLC2A4RGQ9NR83 387 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 ARMCX3Q9UH62 379 aaPredicted RBP13.99□□□□□ -0.17
LTBR-208ENST00000541005 CTNND2Q9UQB3 1225 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 COQ4Q9Y3A0 265 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 NOL4O94818 638 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 CSH1P0DML2 217 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 CSH2P0DML3 217 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 PTPN1P18031 435 aaKnown RBP13.98□□□□□ -0.17
LTBR-208ENST00000541005 FCARP24071 287 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 WEE1P30291 646 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 CDC25CP30307 473 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 RAP1GAPP47736 663 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 TEAD2Q15562 447 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 FAM78AQ5JUQ0 283 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 SPOPLQ6IQ16 392 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 SCARA5Q6ZMJ2 495 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 HFE2Q6ZVN8 426 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 UNC93AQ86WB7 457 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 FBXL13Q8NEE6 735 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 FAM200AQ8TCP9 573 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 ELSPBP1Q96BH3 223 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 MCRS1Q96EZ8 462 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 SPATA17Q96L03 361 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 MYRFLQ96LU7 910 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 ASB16Q96NS5 453 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 NIF3L1Q9GZT8 377 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 FAM124BQ9H5Z6 455 aaPredicted RBP13.98□□□□□ -0.17
LTBR-208ENST00000541005 CYP3A43Q9HB55 503 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 MAGEC2Q9UBF1 373 aaPredicted RBP13.98□□□□□ -0.17
LTBR-208ENST00000541005 ZMYM5Q9UJ78 669 aa13.98□□□□□ -0.17
LTBR-208ENST00000541005 A0A1W2PRU2 124 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 SOBPA7XYQ1 873 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 A8MXQ7 604 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 PMM2O15305 246 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 NARSO43776 548 aaKnown RBP13.97□□□□□ -0.17
LTBR-208ENST00000541005 GABRR2P28476 465 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 GPR15P49685 360 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 CDR1P51861 262 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 CDH8P55286 799 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 MARSP56192 900 aaKnown RBP13.97□□□□□ -0.17
LTBR-208ENST00000541005 CBWD6Q4V339 395 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
LTBR-208ENST00000541005 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 CBWD3Q5JTY5 395 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 CBWD5Q5RIA9 395 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 TMEM150AQ86TG1 271 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 CCDC150Q8NCX0 1101 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 GIPC2Q8TF65 315 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 SMARCD2Q92925 531 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 ELMO3Q96BJ8 720 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 TNIP3Q96KP6 325 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 ZSWIM3Q96MP5 696 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 RPP25Q9BUL9 199 aaKnown RBP13.97□□□□□ -0.17
LTBR-208ENST00000541005 ELOVL4Q9GZR5 314 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 NUP62CLQ9H1M0 184 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 MMRN2Q9H8L6 949 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 WNT16Q9UBV4 365 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 RWDD2AQ9UIY3 292 aa13.97□□□□□ -0.17
LTBR-208ENST00000541005 TRIM66O15016 1216 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 CLSTN1O94985 981 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 GNA14O95837 355 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 GJA1P17302 382 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 NLRP12P59046 1061 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 DDR2Q16832 855 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 CRYBG2Q8N1P7 616 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 FBXL6Q8N531 539 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 MLKLQ8NB16 471 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 ZSCAN18Q8TBC5 510 aaPredicted RBP13.96□□□□□ -0.17
LTBR-208ENST00000541005 GPR152Q8TDT2 470 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 C8orf48Q96LL4 319 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 GCNAQ96QF7 691 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 KXD1Q9BQD3 176 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 B3GNT5Q9BYG0 378 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 ZFP14Q9HCL3 533 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 RAB20Q9NX57 234 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 UXTQ9UBK9 157 aaPredicted RBP13.96□□□□□ -0.17
LTBR-208ENST00000541005 HMGXB4Q9UGU5 601 aa13.96□□□□□ -0.17
LTBR-208ENST00000541005 ATP8B3O60423 1300 aa13.95□□□□□ -0.18
LTBR-208ENST00000541005 SLC38A8A6NNN8 435 aa13.95□□□□□ -0.18
LTBR-208ENST00000541005 LRRN2O75325 713 aa13.95□□□□□ -0.18
LTBR-208ENST00000541005 CILPO75339 1184 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms