RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 RIPOR3Q96MK2 946 aa16.49■□□□□ 0.23
DDB1-218ENST00000540784 KREMEN1Q96MU8 473 aa16.49■□□□□ 0.23
DDB1-218ENST00000540784 SEPT5Q99719 369 aaPredicted RBP16.49■□□□□ 0.23
DDB1-218ENST00000540784 MED10Q9BTT4 135 aa16.49■□□□□ 0.23
DDB1-218ENST00000540784 LSM14BQ9BX40 385 aaKnown RBP16.49■□□□□ 0.23
DDB1-218ENST00000540784 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
DDB1-218ENST00000540784 DNAJC12Q9UKB3 198 aa16.49■□□□□ 0.23
DDB1-218ENST00000540784 KIAA1257Q9ULG3 409 aa16.49■□□□□ 0.23
DDB1-218ENST00000540784 KRT5P13647 590 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 BDNFP23560 247 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 RPL10AP62906 217 aaKnown RBP16.48■□□□□ 0.23
DDB1-218ENST00000540784 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
DDB1-218ENST00000540784 SMAD4Q13485 552 aaKnown RBP16.48■□□□□ 0.23
DDB1-218ENST00000540784 SYCP1Q15431 976 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 CFAP221Q4G0U5 840 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 TMEM270Q6UE05 265 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 UBR7Q8N806 425 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 SLC4A11Q8NBS3 891 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 ATXN2LQ8WWM7 1075 aaKnown RBP16.48■□□□□ 0.23
DDB1-218ENST00000540784 ZNF707Q96C28 371 aaPredicted RBP16.48■□□□□ 0.23
DDB1-218ENST00000540784 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
DDB1-218ENST00000540784 PLCB1Q9NQ66 1216 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 FAM50BQ9Y247 325 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 YIPF1Q9Y548 306 aa16.48■□□□□ 0.23
DDB1-218ENST00000540784 ATP8B3O60423 1300 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 CLDN5O00501 218 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 TEX33O43247 280 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 MBTPS2O43462 519 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 SOAT2O75908 522 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 PAPLNO95428 1278 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 POU2F2P09086 479 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 PTPN2P17706 415 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 GRIK1P39086 918 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 MTHFRP42898 656 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 MAGEA11P43364 429 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 UBASH3AP57075 661 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 NR1I3Q14994 352 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 DDR2Q16832 855 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 IQCEQ6IPM2 695 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 PTCRAQ6ISU1 281 aaPredicted RBP16.47■□□□□ 0.23
DDB1-218ENST00000540784 DPY19L2P1Q6NXN4 242 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 VSTM1Q6UX27 236 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 SCN4BQ8IWT1 228 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 HNRNPABQ99729 332 aaKnown RBP16.47■□□□□ 0.23
DDB1-218ENST00000540784 RHOBTB2Q9BYZ6 727 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 FAM49BQ9NUQ9 324 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 SIK3Q9Y2K2 1263 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 USP15Q9Y4E8 981 aaPredicted RBP16.47■□□□□ 0.23
DDB1-218ENST00000540784 ASB3Q9Y575 518 aa16.47■□□□□ 0.23
DDB1-218ENST00000540784 A0A1B0GTH6 734 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 RNF225M0QZC1 329 aaPredicted RBP16.46■□□□□ 0.23
DDB1-218ENST00000540784 PAEPP09466 180 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 VDRP11473 427 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 CCDC130P13994 396 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 UCHL3P15374 230 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 CD19P15391 556 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 USP8P40818 1118 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 KLK7P49862 253 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 VEPH1Q14D04 833 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 TAF12Q16514 161 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 SMYD5Q6GMV2 418 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 PAQR9Q6ZVX9 377 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 GRASPQ7Z6J2 395 aaPredicted RBP16.46■□□□□ 0.23
DDB1-218ENST00000540784 DNAJB7Q7Z6W7 309 aaPredicted RBP16.46■□□□□ 0.23
DDB1-218ENST00000540784 ITIH5Q86UX2 942 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 FUKQ8N0W3 1084 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 RBBP8NLQ8NC74 664 aaPredicted RBP16.46■□□□□ 0.23
DDB1-218ENST00000540784 NEK11Q8NG66 645 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 SLC2A14Q8TDB8 520 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 GIPC2Q8TF65 315 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 NECTIN4Q96NY8 510 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 ZNF518BQ9C0D4 1074 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 FAM207AQ9NSI2 230 aaPredicted RBP16.46■□□□□ 0.23
DDB1-218ENST00000540784 CEP72Q9P209 647 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
DDB1-218ENST00000540784 PLXNA3P51805 1871 aa16.46■□□□□ 0.22
DDB1-218ENST00000540784 TSC2P49815 1807 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 REV3LO60673 3130 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
DDB1-218ENST00000540784 RFX1P22670 979 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 ANXA13P27216 316 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 ADORA2BP29275 332 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 RAPGEF1Q13905 1077 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 CBX2Q14781 532 aaPredicted RBP16.45■□□□□ 0.22
DDB1-218ENST00000540784 SGO2Q562F6 1265 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 FEZF2Q8TBJ5 459 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 SUSD6Q92537 303 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 C8orf48Q96LL4 319 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 CORO1BQ9BR76 489 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 STK33Q9BYT3 514 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 IFNKQ9P0W0 207 aa16.45■□□□□ 0.22
DDB1-218ENST00000540784 DNMT3BQ9UBC3 853 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms