RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 BCCIPQ9P287 314 aaKnown RBP eCLIP10.07□□□□□ -0.8
LCOR-209ENST00000540664 ANAPC5Q9UJX4 755 aa10.07□□□□□ -0.8
LCOR-209ENST00000540664 DNPEPQ9ULA0 475 aa10.07□□□□□ -0.8
LCOR-209ENST00000540664 GOLGA8SH3BPF8 625 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 TCEA3O75764 348 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 TTC4O95801 387 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 KRT7P08729 469 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 SMIM10L2AP0DMW4 78 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 SMIM10L2BP0DMW5 78 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 IL1R2P27930 398 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 MMP13P45452 471 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 NDST1P52848 882 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 TRIP13Q15645 432 aaPredicted RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 KIZQ2M2Z5 673 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 ZNF365Q70YC5 407 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 APBB1IPQ7Z5R6 666 aaPredicted RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 RASAL3Q86YV0 1011 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 SLC35B2Q8TB61 432 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 SNX27Q96L92 541 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 FAM118BQ9BPY3 351 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 FRMD8P1Q9BZ68 369 aaPredicted RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 GCOM2Q9BZD3 368 aaPredicted RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 CXCL16Q9H2A7 254 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 ADAM7Q9H2U9 754 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 METTL5Q9NRN9 209 aaKnown RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 RSPH14Q9UHP6 348 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 M0QYV0 167 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 HAS3O00219 553 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 TULP2O00295 520 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 NPTXRO95502 500 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 IGHA2P01877 340 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 ITGAVP06756 1048 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 PFKMP08237 780 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 ZNF865P0CJ78 1059 aaPredicted RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 ATF7P17544 494 aaPredicted RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 CCT5P48643 541 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 VCPP55072 806 aaKnown RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 AUHQ13825 339 aaKnown RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 STILQ15468 1287 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 CCDC142Q17RM4 750 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 PKDCCQ504Y2 493 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 CMASQ8NFW8 434 aaPredicted RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 USP6NLQ92738 828 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 ZMAT2Q96NC0 199 aaKnown RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 DDX23Q9BUQ8 820 aaKnown RBP10.06□□□□□ -0.8
LCOR-209ENST00000540664 CDHR5Q9HBB8 845 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 CPA4Q9UI42 421 aa10.06□□□□□ -0.8
LCOR-209ENST00000540664 TRIP11Q15643 1979 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 LRRD1A4D1F6 860 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 DNALI1O14645 258 aaPredicted RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 RGS16O15492 202 aaPredicted RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 DYNC1LI2O43237 492 aaPredicted RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 TRAPPC3O43617 180 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 KDELR1P24390 212 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 PCK1P35558 622 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 MYO1EQ12965 1108 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 HIC1Q14526 733 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 HADHQ16836 314 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 ODF2Q5BJF6 829 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 IZUMO3Q5VZ72 239 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 KAZNQ674X7 775 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 BBS12Q6ZW61 710 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 NLRP14Q86W24 1093 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 CCDC25Q86WR0 208 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 ZCCHC9Q8N567 271 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 LRRC52Q8N7C0 313 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 GLIS1Q8NBF1 620 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 EPS8L3Q8TE67 593 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 ACSF2Q96CM8 615 aaPredicted RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 HEXIM2Q96MH2 286 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 NT5C1AQ9BXI3 368 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 SNTG2Q9NY99 539 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 NINJ2Q9NZG7 142 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 FLRT1Q9NZU1 646 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 RRP15Q9Y3B9 282 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 IGF2BP3O00425 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
LCOR-209ENST00000540664 NDUFAB1O14561 156 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 RASGRF2O14827 1237 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 ENDOD1O94919 500 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 FAM107AO95990 144 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 AXLP30530 894 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 ZNF143P52747 638 aaPredicted RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 IFI35P80217 286 aaPredicted RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 OLFML2BQ68BL8 750 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 CHADLQ6NUI6 762 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 NOTUMQ6P988 496 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 CATSPER4Q7RTX7 472 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 EMC1Q8N766 993 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 IPO4Q8TEX9 1081 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 SERPINB12Q96P63 405 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 CCT8L2Q96SF2 557 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 EIF2AQ9BY44 585 aaKnown RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 STMN4Q9H169 189 aaPredicted RBP10.05□□□□□ -0.8
LCOR-209ENST00000540664 TSPAN16Q9UKR8 245 aa10.05□□□□□ -0.8
LCOR-209ENST00000540664 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms