RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 FAM53CQ9NYF3 392 aa4.47□□□□□ -1.69
TSG101-205ENST00000540555 PUF60Q9UHX1 559 aaKnown RBP4.47□□□□□ -1.69
TSG101-205ENST00000540555 CTDP1Q9Y5B0 961 aaPredicted RBP4.47□□□□□ -1.69
TSG101-205ENST00000540555 IRAK3Q9Y616 596 aa4.47□□□□□ -1.69
TSG101-205ENST00000540555 NLRC5Q86WI3 1866 aa4.47□□□□□ -1.69
TSG101-205ENST00000540555 FRMPD2Q68DX3 1309 aaPredicted RBP4.46□□□□□ -1.69
TSG101-205ENST00000540555 ZBED9Q6R2W3 1325 aa4.46□□□□□ -1.69
TSG101-205ENST00000540555 ATMQ13315 3056 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 DOPEY1Q5JWR5 2465 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 CACNA1FO60840 1977 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 MYOCOSA0A1B0GUC4 107 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 C17orf102A2RUQ5 167 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 OR14I1A6ND48 311 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 LRRC10BA6NIK2 292 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 H7BY64 318 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 J3QKU1 62 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 ASMTLO95671 621 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 CRTAMO95727 393 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 CYBBP04839 570 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 GNAI2P04899 355 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 ICAM1P05362 532 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 STAG3L1P0CL83 205 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 ALAS1P13196 640 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 CEACAM1P13688 526 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 NOVA1P51513 510 aaKnown RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 STAT2P52630 851 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 MESP2Q0VG99 397 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 PTPN14Q15678 1187 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 MLANAQ16655 118 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 LETM2Q2VYF4 491 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 AASDHQ4L235 1098 aaPredicted RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 FNDC3BQ53EP0 1204 aaKnown RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 FBXO47Q5MNV8 452 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 GORABQ5T7V8 394 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 PLPP4Q5VZY2 271 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 TSSK4Q6SA08 328 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 PAQR3Q6TCH7 311 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 CYP26C1Q6V0L0 522 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 RPTNQ6XPR3 784 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 HOMER1Q86YM7 354 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 DHX37Q8IY37 1157 aaKnown RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 ZNF843Q8N446 348 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 C12orf76Q8N812 135 aaPredicted RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 COLGALT1Q8NBJ5 622 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.46□□□□□ -1.7
TSG101-205ENST00000540555 FEZF2Q8TBJ5 459 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 USP33Q8TEY7 942 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 STAG1Q8WVM7 1258 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 CLEC4DQ8WXI8 215 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 ATP6V0A1Q93050 837 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 TRMT2BQ96GJ1 504 aaKnown RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 TMEM169Q96HH4 297 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 LOXL4Q96JB6 756 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 DIRC2Q96SL1 478 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 NELL2Q99435 816 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 MPHOSPH6Q99547 160 aaKnown RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 C16orf70Q9BSU1 422 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 ALG1Q9BT22 464 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 FTHL17Q9BXU8 183 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 CRNKL1Q9BZJ0 848 aaKnown RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 CWH43Q9H720 699 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 SFXN1Q9H9B4 322 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 RXFP1Q9HBX9 757 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 TRIM39Q9HCM9 518 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 LTB4R2Q9NPC1 389 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 NDOR1Q9UHB4 597 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 MTF2Q9Y483 593 aaPredicted RBP4.46□□□□□ -1.7
TSG101-205ENST00000540555 SQORQ9Y6N5 450 aa4.46□□□□□ -1.7
TSG101-205ENST00000540555 MYO10Q9HD67 2058 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 TTC3P53804 2025 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 ADAMTS20P59510 1910 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 A0A1W2PQJ5 194 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 ZC3H12DA2A288 527 aaKnown RBP4.45□□□□□ -1.7
TSG101-205ENST00000540555 SHISA7A6NL88 538 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 NUDT19A8MXV4 375 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 HRKO00198 91 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 NFIBO00712 420 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 AQP7O14520 342 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 BCAR3O75815 825 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 PAPSS2O95340 614 aaPredicted RBP4.45□□□□□ -1.7
TSG101-205ENST00000540555 ZNF286BP0CG31 522 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 SMIM10L2AP0DMW4 78 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 SMIM10L2BP0DMW5 78 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 GHRP10912 638 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 TRIM27P14373 513 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 LAG3P18627 525 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 NCLP19338 710 aaKnown RBP4.45□□□□□ -1.7
TSG101-205ENST00000540555 PPM1AP35813 382 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 GATMP50440 423 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 MTAPQ13126 283 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 HTR4Q13639 388 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 SIM2Q14190 667 aaPredicted RBP4.45□□□□□ -1.7
TSG101-205ENST00000540555 SMC1AQ14683 1233 aaKnown RBP4.45□□□□□ -1.7
TSG101-205ENST00000540555 NR1I3Q14994 352 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 LPAL2Q16609 132 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 LY6KQ17RY6 165 aa4.45□□□□□ -1.7
TSG101-205ENST00000540555 PAN2Q504Q3 1202 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms