RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 IYDQ6PHW0 289 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 SLC30A10Q6XR72 485 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 RNF19BQ6ZMZ0 732 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 HEATR4Q86WZ0 1026 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 LILRB2Q8N423 598 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 VGLL2Q8N8G2 317 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 ENAHQ8N8S7 591 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-214ENST00000540539 C7orf57Q8NEG2 295 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 CAPSLQ8WWF8 208 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 PYDC1Q8WXC3 89 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 OLFM1Q99784 485 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 TUBB6Q9BUF5 446 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 KIAA1586Q9HCI6 787 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 S100A14Q9HCY8 104 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 SLC7A8Q9UHI5 535 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 GNPTGQ9UJJ9 305 aa9.9□□□□□ -0.82
CLIP1-214ENST00000540539 A8MX80 341 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 DENRO43583 198 aaKnown RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A9O60656 530 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 FKBP6O75344 327 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 ESRRBO95718 433 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A6P19224 532 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A1P22309 533 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A4P22310 534 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A3P35503 534 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A5P35504 534 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 P2RX3P56373 397 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SELENBP1Q13228 472 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 MAPK6Q16659 721 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 C6orf163Q5TEZ5 329 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 C1orf146Q5VVC0 180 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 CCDC62Q6P9F0 684 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 TUBA3EQ6PEY2 450 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 LMBR1LQ6UX01 489 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 RGS9BPQ6ZS82 235 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 OTOAQ7RTW8 1153 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 AMIGO2Q86SJ2 522 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 JAMLQ86YT9 394 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 TMEM151BQ8IW70 566 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SPARTQ8N0X7 666 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 FBXO27Q8NI29 283 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SGCDQ92629 289 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 GLMNQ92990 594 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 FERD3LQ96RJ6 166 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 COQ7Q99807 217 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 DCUN1D5Q9BTE7 237 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PLA2G12BQ9BX93 195 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 WNT8AQ9H1J5 351 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 MMRN2Q9H8L6 949 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A7Q9HAW7 530 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A10Q9HAW8 530 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 UGT1A8Q9HAW9 530 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 ARHGEF4Q9NR80 690 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SEPT10Q9P0V9 454 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 DBNLQ9UJU6 430 aaKnown RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PCDHA4Q9UN74 947 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SCINQ9Y6U3 715 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 ADGRA3Q8IWK6 1321 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 A0A1B0GTW7 788 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 FAM25EA8MYX2 175 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 J3QRK9 145 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 POLRMTO00411 1230 aaKnown RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SH3BP5O60239 455 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 GABBR2O75899 941 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 ACSL3O95573 720 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SERPINB2P05120 415 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 MMP10P09238 476 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PRKACAP17612 351 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 JAK1P23458 1154 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 KRT2P35908 639 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 RPL21P46778 160 aaKnown RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 CPA2P48052 419 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 DRG2P55039 364 aaKnown RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 BASP1P80723 227 aaKnown RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 NTRK3Q16288 839 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 ULK2Q8IYT8 1036 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PPM1KQ8N3J5 372 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 ICA1LQ8NDH6 482 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 RAB3IL1Q8TBN0 382 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SCFD1Q8WVM8 642 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PSPC1Q8WXF1 523 aaKnown RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 FBXL8Q96CD0 374 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PGBD4Q96DM1 585 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 HES6Q96HZ4 224 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PSD2Q9BQI7 771 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 HAUS8Q9BT25 410 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 RSPH9Q9H1X1 276 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-214ENST00000540539 DCTN4Q9UJW0 460 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 GRID1Q9ULK0 1009 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 SPEF1Q9Y4P9 236 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 PCM1Q15154 2024 aa9.89□□□□□ -0.83
CLIP1-214ENST00000540539 LAMB2P55268 1798 aa9.88□□□□□ -0.83
CLIP1-214ENST00000540539 CAPN8A6NHC0 703 aa9.88□□□□□ -0.83
CLIP1-214ENST00000540539 TMX2-CTNND1H3BSU7 103 aa9.88□□□□□ -0.83
CLIP1-214ENST00000540539 H7C0C1 242 aa9.88□□□□□ -0.83
CLIP1-214ENST00000540539 PSMA7O14818 248 aa9.88□□□□□ -0.83
CLIP1-214ENST00000540539 PDE8AO60658 829 aa9.88□□□□□ -0.83
CLIP1-214ENST00000540539 DNAJA2O60884 412 aa9.88□□□□□ -0.83
CLIP1-214ENST00000540539 FGGP02679 453 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms