RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 CCDC130P13994 396 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 TCF4P15884 667 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 TAF6P49848 677 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 PSMC1P62191 440 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 OGDHQ02218 1023 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 MAMLD1Q13495 774 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 TCEAL1Q15170 157 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 PKDCCQ504Y2 493 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 TIGD5Q53EQ6 642 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 WSCD1Q658N2 575 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 SLC24A5Q71RS6 500 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 TMCO2Q7Z6W1 182 aaPredicted RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 TTC30BQ8N4P2 665 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 NOA1Q8NC60 698 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 ZNF564Q8TBZ8 553 aaPredicted RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 PAWRQ96IZ0 340 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 SMAPO00193 183 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 ENPP3O14638 875 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 DDX3YO15523 660 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 SLU7O95391 586 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 ERBB2P04626 1255 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 NSFP46459 744 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 BRCC3P46736 316 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 GJA8P48165 433 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 HADHBP55084 474 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 HES6Q96HZ4 224 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 RTP3Q9BQQ7 232 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
C1R-206ENST00000540394 LUC7LQ9NQ29 371 aaKnown RBP12.11□□□□□ -0.47
C1R-206ENST00000540394 MTA2O94776 668 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 HSPA1AP0DMV8 641 aaKnown RBP12.1□□□□□ -0.47
C1R-206ENST00000540394 HSPA1BP0DMV9 641 aaKnown RBP12.1□□□□□ -0.47
C1R-206ENST00000540394 NAIF1Q69YI7 327 aaPredicted RBP12.1□□□□□ -0.47
C1R-206ENST00000540394 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 TRIM74Q86UV6 250 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 OR6B3Q8NGW1 331 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 ADAM22Q9P0K1 906 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 G3BP2Q9UN86 482 aaKnown RBP12.1□□□□□ -0.47
C1R-206ENST00000540394 ALG6Q9Y672 507 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 TMEM110-MUSTN1A8MSY1 372 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 CD101Q93033 1021 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 RPS6KC1Q96S38 1066 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 ARPC5LQ9BPX5 153 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 NT5C1AQ9BXI3 368 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 INPPL1O15357 1258 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 BEST1O76090 585 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 AARSP49588 968 aaKnown RBP eCLIP12.1□□□□□ -0.47
C1R-206ENST00000540394 RAB27AP51159 221 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 RNASE9P60153 205 aaKnown RBP12.1□□□□□ -0.47
C1R-206ENST00000540394 MESDQ14696 234 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 TRNP1Q6NT89 227 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 PAQR9Q6ZVX9 377 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 ADGRF2Q8IZF7 708 aa12.1□□□□□ -0.47
C1R-206ENST00000540394 BPTFQ12830 3046 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 M0QYV0 167 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 CLDN5O00501 218 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 CYB561D2O14569 222 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 GABRDO14764 452 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 COMTP21964 271 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 CACNA2D1P54289 1103 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 RAB6CQ53S08 254 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 PLEKHA7Q6IQ23 1121 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 RSRC2Q7L4I2 434 aaKnown RBP12.09□□□□□ -0.47
C1R-206ENST00000540394 SENP8Q96LD8 212 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 RAB6CQ9H0N0 254 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 ATP11BQ9Y2G3 1177 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 A8MXQ7 604 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 TRIM66O15016 1216 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 P4HA1P13674 534 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 CA8P35219 290 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 PBX3P40426 434 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
C1R-206ENST00000540394 ELF2Q15723 593 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
C1R-206ENST00000540394 APPL2Q8NEU8 664 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 TMEM209Q96SK2 561 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 LHX5Q9H2C1 402 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 ANAPC7Q9UJX3 599 aa12.09□□□□□ -0.47
C1R-206ENST00000540394 TRIM43BA6NCK2 446 aa12.08□□□□□ -0.47
C1R-206ENST00000540394 GNL1P36915 607 aaPredicted RBP12.08□□□□□ -0.47
C1R-206ENST00000540394 DSC1Q08554 894 aa12.08□□□□□ -0.47
C1R-206ENST00000540394 CNGA2Q16280 664 aa12.08□□□□□ -0.47
C1R-206ENST00000540394 SV2CQ496J9 727 aa12.08□□□□□ -0.47
C1R-206ENST00000540394 LCLAT1Q6UWP7 414 aa12.08□□□□□ -0.47
C1R-206ENST00000540394 ANKS1BQ7Z6G8 1248 aa12.08□□□□□ -0.47
C1R-206ENST00000540394 RHOT2Q8IXI1 618 aa12.08□□□□□ -0.47
C1R-206ENST00000540394 UHMK1Q8TAS1 419 aaKnown RBP12.08□□□□□ -0.47
C1R-206ENST00000540394 TRIM43Q96BQ3 446 aaPredicted RBP12.08□□□□□ -0.47
C1R-206ENST00000540394 ZNF560Q96MR9 790 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms