RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 STXBP4Q6ZWJ1 553 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 C4orf33Q8N1A6 199 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 BBOF1Q8ND07 529 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 ICA1LQ8NDH6 482 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 ATP8B4Q8TF62 1192 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 C9orf72Q96LT7 481 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 NAP1L4Q99733 375 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 CCDC28BQ9BUN5 200 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 USP20Q9Y2K6 914 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 RIPK3Q9Y572 518 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 RBM47A0AV96 593 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 B2RBV5 119 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 LRRN2O75325 713 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 ITGA2BP08514 1039 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 CTGFP29279 349 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 CPA2P48052 419 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 SERPINB8P50452 374 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 OLFML1Q6UWY5 402 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 RHOT2Q8IXI1 618 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 RNF169Q8NCN4 708 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 DNERQ8NFT8 737 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 MAML1Q92585 1016 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 MTBPQ96DY7 904 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 PPARGC1AQ9UBK2 798 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 HEY2Q9UBP5 337 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 CIDEBQ9UHD4 219 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 ZNF214Q9UL59 606 aaPredicted RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDB1-217ENST00000540166 STARD13Q9Y3M8 1113 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 PCDHGA4Q9Y5G9 962 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 SMIM31A0A1B0GVY4 71 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 SPECC1L-ADORA2AF8WAN1 911 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 ACRP10323 421 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 ATP6V1B1P15313 513 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 CREB1P16220 341 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 TAL1P17542 331 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 CDK7P50613 346 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■■■■□ 20.4
DDB1-217ENST00000540166 YARSP54577 528 aaKnown RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 KRT17Q04695 432 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 RAB30Q15771 203 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 ASTE1Q2TB18 679 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 OR52E8Q6IFG1 317 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 TRIM67Q6ZTA4 783 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 SFR1Q86XK3 245 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 ABI1Q8IZP0 508 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 SLC26A7Q8TE54 656 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 MORC4Q8TE76 937 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 LRRC15Q8TF66 581 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 NAT14Q8WUY8 206 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 AFG1LQ8WV93 481 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 THTPAQ9BU02 230 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 FAM49AQ9H0Q0 323 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 OSGEPQ9NPF4 335 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 SAR1AQ9NR31 198 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 SMG5Q9UPR3 1016 aaKnown RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 MYH7P12883 1935 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 A0A1W2PQ45 241 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 A0A1W2PQY0 241 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 DDX3XO00571 662 aaKnown RBP eCLIP9.1□□□□□ -0.952e-22■■■■□ 23.7
DDB1-217ENST00000540166 EXOC3O60645 756 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 MAN1A1P33908 653 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 DRG2P55039 364 aaKnown RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 BTKQ06187 659 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 MOGSQ13724 837 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 CMPK2Q5EBM0 449 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 B3GNT6Q6ZMB0 384 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 LRRC55Q6ZSA7 311 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 CYFIP1Q7L576 1253 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 ENDOVQ8N8Q3 282 aaKnown RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 SEZ6LQ9BYH1 1024 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 MYH7BA7E2Y1 1941 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 ARVCFO00192 962 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 CASQ2O14958 399 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 CTSHP09668 335 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 CYBAP13498 195 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 PLS3P13797 630 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 GALK1P51570 392 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 OVGP1Q12889 678 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 ORC2Q13416 577 aaPredicted RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 KNOP1Q1ED39 458 aaKnown RBP9.1□□□□□ -0.95
DDB1-217ENST00000540166 FAM160B1Q5W0V3 765 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 MFSD5Q6N075 450 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 PPP4R3CPQ6ZMV5 832 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 TPH2Q8IWU9 490 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 TRIML2Q8N7C3 387 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 TAAR1Q96RJ0 339 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 BHMT2Q9H2M3 363 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 SMYD3Q9H7B4 428 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 SLCO1B3Q9NPD5 702 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 NAALADL1Q9UQQ1 740 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 GMEB1Q9Y692 573 aa9.1□□□□□ -0.95
DDB1-217ENST00000540166 H3BRJ5 948 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms