RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TUSC3Q13454 348 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 ZNF268Q14587 947 aaPredicted RBP17.83■□□□□ 0.45
COPS3-212ENST00000539941 PTPROQ16827 1216 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 UPP1Q16831 310 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 GOLGA7BQ2TAP0 167 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 PKDCCQ504Y2 493 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 C1orf53Q5VUE5 145 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 NOA1Q8NC60 698 aaKnown RBP17.83■□□□□ 0.45
COPS3-212ENST00000539941 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.83■□□□□ 0.45
COPS3-212ENST00000539941 LINC01599Q8WXQ3 324 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 BTBD6Q96KE9 485 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 SENP8Q96LD8 212 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 TOX2Q96NM4 488 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.83■□□□□ 0.454e-9■■■■■ 32.8
COPS3-212ENST00000539941 HESX1Q9UBX0 185 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 IP6K2Q9UHH9 426 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 CYTH4Q9UIA0 394 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 TMEM191CA6NGB0 347 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 GABRDO14764 452 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 CEP104O60308 925 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 FGFR1P11362 822 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 MAGEA9P43362 315 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 SNX16P57768 344 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 PLEKHG4Q58EX7 1191 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 PPP1R15BQ5SWA1 713 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 PPP1R26Q5T8A7 1209 aaPredicted RBP17.83■□□□□ 0.44
COPS3-212ENST00000539941 CCDC70Q6NSX1 233 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 C12orf29Q8N999 325 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 STK32AQ8WU08 396 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 MS4A14Q96JA4 679 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 NAP1L3Q99457 506 aaPredicted RBP17.83■□□□□ 0.44
COPS3-212ENST00000539941 ELAC1Q9H777 363 aaKnown RBP17.83■□□□□ 0.44
COPS3-212ENST00000539941 SYNCQ9H7C4 482 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 ST7Q9NRC1 585 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 PCDHA3Q9Y5H8 950 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 DNAH12Q6ZR08 3092 aa17.83■□□□□ 0.44
COPS3-212ENST00000539941 NBNO60934 754 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 LHX1P48742 406 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 PEX5P50542 639 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 TTC31Q49AM3 519 aaPredicted RBP17.82■□□□□ 0.44
COPS3-212ENST00000539941 LLGL2Q6P1M3 1020 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 SLC39A5Q6ZMH5 540 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 PHLDB2Q86SQ0 1253 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 SEPT8Q92599 483 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 CPXM1Q96SM3 734 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 TMEM161AQ9NX61 479 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 KANSL3Q9P2N6 904 aa17.82■□□□□ 0.44
COPS3-212ENST00000539941 ARHGEF37A1IGU5 675 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 CASTOR2A6NHX0 329 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 SIGLEC16A6NMB1 481 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 DCDC2CA8MYV0 355 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 PQBP1O60828 265 aaKnown RBP17.81■□□□□ 0.44
COPS3-212ENST00000539941 POMCP01189 267 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 MNX1P50219 401 aaPredicted RBP17.81■□□□□ 0.44
COPS3-212ENST00000539941 PSMC1P62191 440 aaKnown RBP17.81■□□□□ 0.44
COPS3-212ENST00000539941 DCUN1D2Q6PH85 259 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 LEKR1Q6ZMV7 388 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 XYLT1Q86Y38 959 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 URGCPQ8TCY9 931 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 FNIP1Q8TF40 1166 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 ALG3Q92685 438 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 TRIM7Q9C029 511 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 DPEP3Q9H4B8 488 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 CYLDQ9NQC7 956 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 TMEM59LQ9UK28 342 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 RRP15Q9Y3B9 282 aaKnown RBP17.81■□□□□ 0.44
COPS3-212ENST00000539941 TANC1Q9C0D5 1861 aa17.81■□□□□ 0.44
COPS3-212ENST00000539941 TARSL2A2RTX5 802 aaKnown RBP17.8■□□□□ 0.44
COPS3-212ENST00000539941 ERBB2P04626 1255 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 PFKMP08237 780 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 PDGFRBP09619 1106 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 LMO2P25791 158 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 ACTN2P35609 894 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 BCAT1P54687 386 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 RWDD2BP57060 319 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 C2orf54Q08AI8 447 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 PIGHQ14442 188 aaPredicted RBP17.8■□□□□ 0.44
COPS3-212ENST00000539941 GPNMBQ14956 572 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 CYP4A22Q5TCH4 519 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 DCAF12L1Q5VU92 463 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 WSCD1Q658N2 575 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 DSTYKQ6XUX3 929 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 OSTM1Q86WC4 334 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 TTC30AQ86WT1 665 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 NIPA2Q8N8Q9 360 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 ANKRD52Q8NB46 1076 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 UBA3Q8TBC4 463 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 KRT35Q92764 455 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 MCRS1Q96EZ8 462 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 PLVAPQ9BX97 442 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 FAM49BQ9NUQ9 324 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 SMARCAL1Q9NZC9 954 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 EHD2Q9NZN4 543 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 DSEQ9UL01 958 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
COPS3-212ENST00000539941 CCDC188H7C350 402 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 PSTPIP1O43586 416 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 ODC1P11926 461 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms