RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 NVLO15381 856 aaKnown RBP21.31■■□□□ 1
TMEM260-203ENST00000539559 ZC3H11AO75152 810 aaKnown RBP eCLIP21.31■■□□□ 1
TMEM260-203ENST00000539559 ZBTB16Q05516 673 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 RNF220Q5VTB9 566 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 CPT1BQ92523 772 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 POLR3FQ9H1D9 316 aaPredicted RBP21.31■■□□□ 1
TMEM260-203ENST00000539559 DCLRE1BQ9H816 532 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 SLC24A2Q9UI40 661 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 ZWINTO95229 277 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 EGFRP00533 1210 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 SLC18A1P54219 525 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 TSNAXIP1Q2TAA8 658 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 MDH1BQ5I0G3 518 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 SNX30Q5VWJ9 437 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 SAMD3Q8N6K7 520 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 PHC3Q8NDX5 983 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 ACTL9Q8TC94 416 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 TMEM143Q96AN5 459 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 ZNF333Q96JL9 665 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 TIPINQ9BVW5 301 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 TJP2Q9UDY2 1190 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 CHMP2BQ9UQN3 213 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 GYG2O15488 501 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 GSC2O15499 205 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 EXTL3O43909 919 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 PLA2G6O60733 806 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 TMEM63AO94886 807 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 BGNP21810 368 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 CDKN2BP42772 138 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 GMPSP49915 693 aaPredicted RBP21.3■■□□□ 1
TMEM260-203ENST00000539559 OTUD4Q01804 1114 aaKnown RBP21.3■■□□□ 1
TMEM260-203ENST00000539559 MTERF2Q49AM1 385 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 TFDP3Q5H9I0 405 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 NIPA1Q7RTP0 329 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 IGDCC3Q8IVU1 814 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 MICALL2Q8IY33 904 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 NTPCRQ9BSD7 190 aaKnown RBP21.3■■□□□ 1
TMEM260-203ENST00000539559 TMEM120AQ9BXJ8 343 aa21.3■■□□□ 1
TMEM260-203ENST00000539559 AGO2Q9UKV8 859 aaKnown RBP21.3■■□□□ 1
TMEM260-203ENST00000539559 CAPN9O14815 690 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 SMIM24O75264 130 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 GARTP22102 1010 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 DNAJC24Q6P3W2 148 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 FAM111AQ96PZ2 611 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 PDCD2LQ9BRP1 358 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 BTBD10Q9BSF8 475 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 TSSK1BQ9BXA7 367 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 TLE6Q9H808 572 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 KCNK13Q9HB14 408 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 RBAKQ9NYW8 714 aaPredicted RBP21.29■■□□□ 1
TMEM260-203ENST00000539559 GJA3Q9Y6H8 435 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 E7ENQ6 273 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 ITGBL1O95965 494 aaPredicted RBP21.29■■□□□ 1
TMEM260-203ENST00000539559 CD48P09326 243 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 MMP8P22894 467 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 JAK3P52333 1124 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 ARFIP2P53365 341 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 C1QBPQ07021 282 aaKnown RBP21.29■■□□□ 1
TMEM260-203ENST00000539559 KLC1Q07866 573 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 RCN2Q14257 317 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 PSMD6Q15008 389 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 NBPF20Q3BBV1 942 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 CEP128Q6ZU80 1094 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 BANPQ8N9N5 519 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 MZB1Q8WU39 189 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 DCAKDQ8WVC6 231 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 SCG3Q8WXD2 468 aaKnown RBP21.29■■□□□ 1
TMEM260-203ENST00000539559 PTCD3Q96EY7 689 aaKnown RBP21.29■■□□□ 1
TMEM260-203ENST00000539559 SERAC1Q96JX3 654 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 LNPEPQ9UIQ6 1025 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 AGTPBP1Q9UPW5 1226 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 SHOC2Q9UQ13 582 aa21.29■■□□□ 1
TMEM260-203ENST00000539559 FARP1Q9Y4F1 1045 aaPredicted RBP21.29■■□□□ 1
TMEM260-203ENST00000539559 E5RJQ4 531 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 TBX10O75333 385 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 ARHGEF16Q5VV41 709 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 PALM2Q8IXS6 379 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 FBXO27Q8NI29 283 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 MCUR1Q96AQ8 359 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 TEPSINQ96N21 525 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 PPP1R12CQ9BZL4 782 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 PCDH9Q9HC56 1237 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 PCDHA10Q9Y5I2 948 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 WASF2Q9Y6W5 498 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 FZD9O00144 591 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 CST3P01034 146 aaPredicted RBP21.28■■□□□ 1
TMEM260-203ENST00000539559 EDN1P05305 212 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 ACADSP16219 412 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 RPL22P35268 128 aaKnown RBP21.28■■□□□ 1
TMEM260-203ENST00000539559 SAMD7Q7Z3H4 446 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 UNC45BQ8IWX7 931 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 VPS52Q8N1B4 723 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 WNK4Q96J92 1243 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 TARS2Q9BW92 718 aaKnown RBP21.28■■□□□ 1
TMEM260-203ENST00000539559 TRIM55Q9BYV6 548 aa21.28■■□□□ 1
TMEM260-203ENST00000539559 FAM237BA0A1B0GVD1 139 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 CST8O60676 142 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 CCDC22O60826 627 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 FAM155BO75949 473 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms