RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 URI1O94763 535 aaPredicted RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ALDH2P05091 517 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 HNRNPLP14866 589 aaKnown RBP eCLIP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 STMN1P16949 149 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 TACR1P25103 407 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 BCL6P41182 706 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 VAMP2P63027 116 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 SMAD4Q13485 552 aaKnown RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 TRPC3Q13507 836 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CUL4AQ13619 759 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 TRIM29Q14134 588 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 EFR3AQ14156 821 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 KRT32Q14532 448 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 TMEM132BQ14DG7 1078 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 PDCD1Q15116 288 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CHRNA2Q15822 529 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 PFKFB4Q16877 469 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 FAM110CQ1W6H9 321 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 FAM26FQ5R3K3 315 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ARMC4Q5T2S8 1044 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 JMJD6Q6NYC1 403 aaPredicted RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ABRAXAS1Q6UWZ7 409 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CCDC73Q6ZRK6 1079 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ESPNLQ6ZVH7 1005 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CEP68Q76N32 757 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CIR1Q86X95 450 aaPredicted RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CCDC103Q8IW40 242 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 RTKN2Q8IZC4 609 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 SAMD14Q8IZD0 417 aaPredicted RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 RNF152Q8N8N0 203 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ATG16L2Q8NAA4 619 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 OR10H5Q8NGA6 315 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 MGARPQ8TDB4 240 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 HTRA1Q92743 480 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 RAX2Q96IS3 184 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CGRRF1Q99675 332 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 PYM1Q9BRP8 204 aaKnown RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 MCMBPQ9BTE3 642 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 SORBS1Q9BX66 1292 aaKnown RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 SLC12A9Q9BXP2 914 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 STK33Q9BYT3 514 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 C22orf23Q9BZE7 217 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 UNKQ9C0B0 810 aaKnown RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 GHITMQ9H3K2 345 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 EPB41L1Q9H4G0 881 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 TRPV4Q9HBA0 871 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 PCDH18Q9HCL0 1135 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 PNPLA8Q9NP80 782 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 TBC1D29Q9UFV1 150 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 HERC5Q9UII4 1024 aaKnown RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 TUBD1Q9UJT1 453 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 VPS28Q9UK41 221 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CBLCQ9ULV8 474 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 C19orf53Q9UNZ5 99 aaPredicted RBP4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ATP23Q9Y6H3 246 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 NAV2Q8IVL1 2488 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 CARMIL1Q5VZK9 1371 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 ERVK-7P63135 1459 aa4.23□□□□□ -1.73
AC055720.1-201ENST00000539552 MUC6Q6W4X9 2439 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 PHRF1Q9P1Y6 1649 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 LRRIQ1Q96JM4 1722 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CCDC196A0A1B0GTZ2 297 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 C17orf113A0A1B0GUU1 675 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 PI4KAP2A4QPH2 592 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 SCDO00767 359 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 MUSKO15146 869 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 DOK2O60496 412 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CYP2C8P10632 490 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 ALOX15P16050 662 aaPredicted RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 DESP17661 470 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 IL11P20809 199 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 ENPP1P22413 925 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 TGM1P22735 817 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 HPDP32754 393 aaPredicted RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 GJA4P35212 333 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CTSKP43235 329 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 TNNT3P45378 269 aaPredicted RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 MRE11P49959 708 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 PDE6CP51160 858 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 ITGA8P53708 1063 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 BCAR1P56945 870 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 JAM2P57087 298 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CORO7P57737 925 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 SMAD3P84022 425 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 SRSF2Q01130 221 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 SMAD2Q15796 467 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 SLC35G1Q2M3R5 365 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 FIGNQ5HY92 759 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 TATDN1Q6P1N9 297 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 GGT6Q6P531 493 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 UNC5DQ6UXZ4 953 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 MCM10Q7L590 875 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CPNE8Q86YQ8 564 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 LIX1LQ8IVB5 337 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CPOQ8IVL8 374 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CCDC33Q8N5R6 958 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 TDRD7Q8NHU6 1098 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 SPPL3Q8TCT6 385 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 N4BP2L2Q92802 583 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms