RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MC2RQ01718 297 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 BRD3Q15059 726 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ELF2Q15723 593 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 HEATR3Q7Z4Q2 680 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LDHDQ86WU2 507 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 EPHX4Q8IUS5 362 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CPOQ8IVL8 374 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ZDHHC23Q8IYP9 409 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ANKRD42Q8N9B4 389 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RNF169Q8NCN4 708 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 OR14K1Q8NGZ2 314 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ZFP28Q8NHY6 868 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 STT3BQ8TCJ2 826 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 NELL1Q92832 810 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DACT3Q96B18 629 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RGMAQ96B86 450 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ZBTB8AQ96BR9 441 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FAM89AQ96GI7 184 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DYDC2Q96IM9 177 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 C11orf84Q9BUA3 381 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PITPNM3Q9BZ71 974 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MRPL46Q9H2W6 279 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MAGIXQ9H6Y5 334 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CERS4Q9HA82 394 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MLXIPQ9HAP2 919 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 KIAA1586Q9HCI6 787 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ARFGAP3Q9NP61 516 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MAP3K20Q9NYL2 800 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PLA2G3Q9NZ20 509 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TMOD4Q9NZQ9 345 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LPAR3Q9UBY5 353 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LRCH1Q9Y2L9 728 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 A0A087WV48 116 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PRG0 241 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 GUCY1B2O75343 617 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MOSPD3O75425 235 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 IPO13O94829 963 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RHOBTB3O94955 611 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 VNN1O95497 513 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ABHD16AO95870 558 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CD1AP06126 327 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 NBPF7P0C2Y1 421 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 NPPBP16860 134 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DDX5P17844 614 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ITPKBP27987 946 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 STT3AP46977 705 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 KCNC1P48547 511 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ITGA8P53708 1063 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SUMO3P55854 103 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FOXO4P98177 505 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TLE3Q04726 772 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RAB32Q13637 225 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MPEG1Q2M385 716 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DCAF6Q58WW2 860 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RAP1GAP2Q684P5 730 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ANO7Q6IWH7 933 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PPP1R32Q7Z5V6 425 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 GPR135Q8IZ08 494 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF366Q8N895 744 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ATG16L2Q8NAA4 619 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SYT8Q8NBV8 401 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FAM71BQ8TC56 605 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF398Q8TD17 642 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MZB1Q8WU39 189 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 HTRA1Q92743 480 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TNPO1Q92973 898 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ATP2A3Q93084 1043 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TMX3Q96JJ7 454 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TNIP3Q96KP6 325 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PNKPQ96T60 521 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DPYSL5Q9BPU6 564 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TTLL2Q9BWV7 592 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 VPS11Q9H270 941 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SARS2Q9NP81 518 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ARGLU1Q9NWB6 273 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RRN3Q9NYV6 651 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ARHGAP20Q9P2F6 1191 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TBC1D14Q9P2M4 693 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SHOC2Q9UQ13 582 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FAM170AA1A519 330 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ADM5C9JUS6 153 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FFAR3O14843 346 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DCLK1O15075 740 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DHHO43323 396 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PRAMEF4O60810 478 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CNOT3O75175 753 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 NXPH3O95157 252 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 POMCP01189 267 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 A1BGP04217 495 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ARP10275 920 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 BDNFP23560 247 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SARSP49591 514 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CCR5P51681 352 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LIMK1P53667 647 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 POSTNQ15063 836 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MAPKAPK3Q16644 382 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ST3GAL2Q16842 350 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TWISTNBQ3B726 338 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ZACNQ401N2 412 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms