RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 KRT19P08727 400 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 SPEM2Q0P670 501 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 SRSF5Q13243 272 aaKnown RBP17.94■□□□□ 0.46
PTPN6-210ENST00000538318 DDR2Q16832 855 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 SOWAHAQ2M3V2 549 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 TMEM196Q5HYL7 178 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 TRIM68Q6AZZ1 485 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 LIMS2Q7Z4I7 341 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 CCDC65Q8IXS2 484 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 ADGRF2Q8IZF7 708 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 PDILTQ8N807 584 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 FUBP3Q96I24 572 aaKnown RBP eCLIP17.94■□□□□ 0.46
PTPN6-210ENST00000538318 EBF3Q9H4W6 596 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 INTS13Q9NVM9 706 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 CDV3Q9UKY7 258 aaKnown RBP17.94■□□□□ 0.46
PTPN6-210ENST00000538318 SPTBN2O15020 2390 aa17.94■□□□□ 0.46
PTPN6-210ENST00000538318 RALGAPA1Q6GYQ0 2036 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 TMEM191BP0C7N4 346 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 PCSK1P29120 753 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 MYO1EQ12965 1108 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 CCDC142Q17RM4 750 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 HEATR6Q6AI08 1181 aaKnown RBP17.93■□□□□ 0.46
PTPN6-210ENST00000538318 FSTL4Q6MZW2 842 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 FAM171BQ6P995 826 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 STXBP4Q6ZWJ1 553 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 WDR5BQ86VZ2 330 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 RIN3Q8TB24 985 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 NOC3LQ8WTT2 800 aaKnown RBP17.93■□□□□ 0.46
PTPN6-210ENST00000538318 ANKRD36BP1Q96IX9 119 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 RTKNQ9BST9 563 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 LRRC27Q9C0I9 530 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 TNMDQ9H2S6 317 aa17.93■□□□□ 0.46
PTPN6-210ENST00000538318 HCRTO43612 131 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 STX6O43752 255 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 HOXC13P31276 330 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 AMPD2Q01433 879 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 GRSF1Q12849 480 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPN6-210ENST00000538318 SURF1Q15526 300 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 E2F4Q16254 413 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 LMBRD2Q68DH5 695 aaPredicted RBP17.92■□□□□ 0.46
PTPN6-210ENST00000538318 CC2D1AQ6P1N0 951 aaPredicted RBP17.92■□□□□ 0.46
PTPN6-210ENST00000538318 PKN3Q6P5Z2 889 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 SPATA2LQ8IUW3 424 aaPredicted RBP17.92■□□□□ 0.46
PTPN6-210ENST00000538318 LINC00301Q8NCQ3 95 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 GLIS3Q8NEA6 775 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 SEMA4GQ9NTN9 838 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 KBTBD4Q9NVX7 518 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.92■□□□□ 0.46
PTPN6-210ENST00000538318 ATG2BQ96BY7 2078 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 PTPRJQ12913 1337 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 GREB1Q4ZG55 1949 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 ANAPC1Q9H1A4 1944 aa17.92■□□□□ 0.46
PTPN6-210ENST00000538318 ZNF233A6NK53 670 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 ATG13O75143 517 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 ARSAP15289 507 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 HOXD13P35453 343 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 MAGEA11P43364 429 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 PDGFRLQ15198 375 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 STK38Q15208 465 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 CSRP2Q16527 193 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.91■□□□□ 0.46
PTPN6-210ENST00000538318 CBWD2Q8IUF1 395 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 OR5B17Q8NGF7 314 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 KBTBD7Q8WVZ9 684 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 HPS3Q969F9 1004 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 HPDLQ96IR7 371 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 TRIM9Q9C026 710 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 CUEDC2Q9H467 287 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 HSPBP1Q9NZL4 362 aa17.91■□□□□ 0.46
PTPN6-210ENST00000538318 CCDC163A0A0D9SF12 145 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 SPTLC2O15270 562 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 PPP6R2O75170 966 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 TNNC2P02585 160 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 USP17L7P0C7H9 530 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 MTF1Q14872 753 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 ZNF77Q15935 545 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 DUOXA2Q1HG44 320 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 CNNM4Q6P4Q7 775 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 C4orf50Q6ZRC1 276 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 EPM2AIP1Q7L775 607 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-210ENST00000538318 FAM160A2Q8N612 972 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-210ENST00000538318 NETO1Q8TDF5 533 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 OSCP1Q8WVF1 389 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 SLC22A12Q96S37 553 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 CYP2S1Q96SQ9 504 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 SYT15Q9BQS2 421 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 ECT2Q9H8V3 914 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 KIAA1586Q9HCI6 787 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 FBRSL1Q9HCM7 1045 aaKnown RBP17.9■□□□□ 0.46
PTPN6-210ENST00000538318 TRPC7Q9HCX4 862 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 CDH9Q9ULB4 789 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 R3HCC1Q9Y3T6 440 aaKnown RBP17.9■□□□□ 0.46
PTPN6-210ENST00000538318 SPAG17Q6Q759 2223 aa17.9■□□□□ 0.46
PTPN6-210ENST00000538318 TRAV19A0A0A6YYK7 116 aa17.89■□□□□ 0.45
PTPN6-210ENST00000538318 DCDC2BA2VCK2 349 aa17.89■□□□□ 0.45
PTPN6-210ENST00000538318 EIF3DO15371 548 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTPN6-210ENST00000538318 ATP2C2O75185 946 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms