RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 GOLPH3LQ9H4A5 285 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CWH43Q9H720 699 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 MINDY3Q9H8M7 445 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CWC15Q9P013 229 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TBC1D14Q9P2M4 693 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LIMA1Q9UHB6 759 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 NFE2L3Q9Y4A8 694 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SNX9Q9Y5X1 595 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TANC1Q9C0D5 1861 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 NPHP3-ACAD11A0A0J9YXS1 232 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM150BA6NC51 233 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 MYO1CO00159 1063 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CLIC2O15247 247 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 B4GALT5O43286 388 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 NEBLO76041 1014 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ASS1P00966 412 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 FGFR1P11362 822 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 GLULP15104 373 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ENPP1P22413 925 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 RRM1P23921 792 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 AKAP5P24588 427 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 NFKBIAP25963 317 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 KRT9P35527 623 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 OSTNP61366 133 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SLC5A9Q2M3M2 681 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CFAP221Q4G0U5 840 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ZCWPW2Q504Y3 356 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 INTS6LQ5JSJ4 861 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ARHGAP17Q68EM7 881 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TTI2Q6NXR4 508 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 PDZD4Q76G19 769 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CEP57Q86XR8 500 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TRIM42Q8IWZ5 723 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SIX6OS1Q8N1H7 587 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SCML4Q8N228 414 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF276Q8N554 614 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CCDC112Q8NEF3 446 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SYN2Q92777 582 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LRRC45Q96CN5 670 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SAAL1Q96ER3 474 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 PLEKHG4BQ96PX9 1271 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 FERMT1Q9BQL6 677 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CBWD1Q9BRT8 395 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 NDST4Q9H3R1 872 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 PCIF1Q9H4Z3 704 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SYNCQ9H7C4 482 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CDHR5Q9HBB8 845 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CHST7Q9NS84 486 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ASNSD1Q9NWL6 643 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 STAP1Q9ULZ2 295 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CASTOR2A6NHX0 329 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LGALS16A8MUM7 142 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ANKRD63C9JTQ0 380 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MAN2B1O00754 1011 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZBTB39O15060 712 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ADAMTS3O15072 1205 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TGFB1I1O43294 461 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MGEA5O60502 916 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 AP1G2O75843 785 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LATS1O95835 1130 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 F9P00740 461 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CALB1P05937 261 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MMEP08473 750 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 USP17L7P0C7H9 530 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 FGFR4P22455 802 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 IL4RP24394 825 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 RDXP35241 583 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 GTF2F1P35269 517 aaKnown RBP eCLIP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MLLT6P55198 1093 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LILRA4P59901 499 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 KCNH2Q12809 1159 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CUL2Q13617 745 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PKP1Q13835 747 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PDGFRLQ15198 375 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PTPN14Q15678 1187 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 WDR72Q3MJ13 1102 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 VARS2Q5ST30 1063 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SFMBT2Q5VUG0 894 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PLPP4Q5VZY2 271 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ANKRD54Q6NXT1 300 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 C16orf59Q7L2K0 433 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 BEND5Q7L4P6 421 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 RTN4RL1Q86UN2 441 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CRYBG2Q8N1P7 616 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 DRAXINQ8NBI3 349 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 KIAA0895Q8NCT3 520 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 RNF139Q8WU17 664 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LINC01599Q8WXQ3 324 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SMG7Q92540 1137 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 WNT8BQ93098 351 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 FIZ1Q96SL8 496 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PRKD2Q9BZL6 878 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SLC7A5P2Q9GIP4 190 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 C8orf33Q9H7E9 229 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 UBE2ZQ9H832 354 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PDE11AQ9HCR9 933 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MTMR10Q9NXD2 777 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PCDHB4Q9Y5E5 795 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PPP1R3GB7ZBB8 358 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms