RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PPM1LQ5SGD2 360 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 FAM35AQ86V20 835 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 GAS2L3Q86XJ1 694 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 GPIHBP1Q8IV16 184 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 FAM114A1Q8IWE2 563 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 THEM5Q8N1Q8 247 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 ST13P5Q8NFI4 369 aaPredicted RBP13.95□□□□□ -0.18
CHFR-216ENST00000538235 MYCBPAPQ8TBZ2 947 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 HDAC7Q8WUI4 952 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 TFAP2BQ92481 460 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 SMG7Q92540 1137 aaKnown RBP13.95□□□□□ -0.18
CHFR-216ENST00000538235 TCEAL4Q96EI5 215 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 NAP1L5Q96NT1 182 aaPredicted RBP13.95□□□□□ -0.18
CHFR-216ENST00000538235 NT5C1BQ96P26 610 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 ASB2Q96Q27 587 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 SEPT5Q99719 369 aaPredicted RBP13.95□□□□□ -0.18
CHFR-216ENST00000538235 SNX25Q9H3E2 840 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 CYP3A43Q9HB55 503 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 ZDHHC7Q9NXF8 308 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 FHOD1Q9Y613 1164 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 LGALS16A8MUM7 142 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 PRRG1O14668 218 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 AP5Z1O43299 807 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 LETM1O95202 739 aaPredicted RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 HMGA1P17096 107 aaKnown RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 GJA1P17302 382 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 HOXB8P17481 243 aaPredicted RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 BDNFP23560 247 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 PCSK1P29120 753 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 USP46P62068 366 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 TSPY1Q01534 308 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 CBX2Q14781 532 aaPredicted RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 DDR2Q16832 855 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 PRSS36Q5K4E3 855 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 LIN9Q5TKA1 542 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 IQCEQ6IPM2 695 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 GPRIN1Q7Z2K8 1008 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 GRASPQ7Z6J2 395 aaPredicted RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 TMEM150AQ86TG1 271 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 CRYBG2Q8N1P7 616 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 ITFG1Q8TB96 612 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 GIPC2Q8TF65 315 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 SMOQ99835 787 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 IMPG2Q9BZV3 1241 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 IL21Q9HBE4 155 aa13.94□□□□□ -0.18
CHFR-216ENST00000538235 R3HCC1Q9Y3T6 440 aaKnown RBP13.94□□□□□ -0.18
CHFR-216ENST00000538235 CLUHO75153 1309 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 A0A0C4DFX4 3053 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 FSD2A1L4K1 749 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 LRRC10BA6NIK2 292 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 TULP2O00295 520 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 CFHP08603 1231 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 POU2F2P09086 479 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 CEBPBP17676 345 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 SSTR3P32745 418 aaPredicted RBP13.93□□□□□ -0.18
CHFR-216ENST00000538235 CYP27A1Q02318 531 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 GCNT1Q02742 428 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 EXOC3L4Q17RC7 722 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 MGAT5BQ3V5L5 792 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 CFAP221Q4G0U5 840 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 STXBP5Q5T5C0 1151 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
CHFR-216ENST00000538235 GBP6Q6ZN66 633 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 TTC30AQ86WT1 665 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 DCP1BQ8IZD4 617 aaKnown RBP13.93□□□□□ -0.18
CHFR-216ENST00000538235 RNF214Q8ND24 703 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 FAM200AQ8TCP9 573 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 SPPL2BQ8TCT7 592 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 SLC2A14Q8TDB8 520 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 ATXN2LQ8WWM7 1075 aaKnown RBP13.93□□□□□ -0.18
CHFR-216ENST00000538235 MYADMQ96S97 322 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 KCNK16Q96T55 309 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 OXCT2Q9BYC2 517 aaPredicted RBP13.93□□□□□ -0.18
CHFR-216ENST00000538235 MAGEC2Q9UBF1 373 aaPredicted RBP13.93□□□□□ -0.18
CHFR-216ENST00000538235 CNTN6Q9UQ52 1028 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 PCDHB5Q9Y5E4 795 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 TTC28Q96AY4 2481 aa13.93□□□□□ -0.18
CHFR-216ENST00000538235 TRIOO75962 3097 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 HHLA1C9JL84 531 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 F8VP50 259 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 GABBR2O75899 941 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 HNRNPA1P09651 372 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHFR-216ENST00000538235 ADORA2BP29275 332 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 PGFP49763 221 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 EPHA5P54756 1037 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 MRPS5P82675 430 aaKnown RBP13.92□□□□□ -0.18
CHFR-216ENST00000538235 ZP2Q05996 745 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 ITIH3Q06033 890 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 WDR44Q5JSH3 913 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 GAREM2Q75VX8 874 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
CHFR-216ENST00000538235 OLIG1Q8TAK6 271 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 ING5Q8WYH8 240 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 SHC3Q92529 594 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms