RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PHLDB2Q86SQ0 1253 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 UNC93AQ86WB7 457 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 XYLT1Q86Y38 959 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 ALLCQ8N6M5 410 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 MYCBPAPQ8TBZ2 947 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 ZNF473Q8WTR7 871 aaKnown RBP6.98□□□□□ -1.29
USP28-206ENST00000538224 BRI3BPQ8WY22 251 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 PPM1EQ8WY54 764 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 ATG4AQ8WYN0 398 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 TFAP2BQ92481 460 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 USP6NLQ92738 828 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 RNF25Q96BH1 459 aaPredicted RBP6.98□□□□□ -1.29
USP28-206ENST00000538224 ZBTB9Q96C00 473 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 MCRS1Q96EZ8 462 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 KIF12Q96FN5 646 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 CNPY3Q9BT09 278 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 HEMGNQ9BXL5 484 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 SEMA4AQ9H3S1 761 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 R3HDMLQ9H3Y0 253 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 CCDC134Q9H6E4 229 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 SMYD3Q9H7B4 428 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 RSAD1Q9HA92 442 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 CYLDQ9NQC7 956 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 METTL5Q9NRN9 209 aaKnown RBP6.98□□□□□ -1.29
USP28-206ENST00000538224 HESX1Q9UBX0 185 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 AGAP1Q9UPQ3 857 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 ZNF148Q9UQR1 794 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 ACTL7BQ9Y614 415 aa6.98□□□□□ -1.29
USP28-206ENST00000538224 A0A087WUV0 522 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 TLDC2A0PJX2 215 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 C5orf60A6NFR6 353 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 A6NJR5 290 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 F8VP50 259 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 GOLGA8SH3BPF8 625 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 TULP2O00295 520 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 DPYSL4O14531 572 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 MCF2LO15068 1137 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 LRCH4O75427 683 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 ZNF189O75820 626 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 TOMM70O94826 608 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SNAI1O95863 264 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 CD4P01730 458 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SHBGP04278 402 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 RPLP2P05387 115 aaKnown RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 IQCF3P0C7M6 154 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 GNAT1P11488 350 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 TSHRP16473 764 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SMPD1P17405 629 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 RFC1P35251 1148 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 RAP1GAPP47736 663 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 ZNF143P52747 638 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 RASA2Q15283 850 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 OASLQ15646 514 aaKnown RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 P3H1Q32P28 736 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 TNFAIP8L3Q5GJ75 292 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 ERMARDQ5T6L9 678 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 FAM102AQ5T9C2 384 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 CYP4A22Q5TCH4 519 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SPRYD7Q5W111 196 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 KAZNQ674X7 775 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 HIBCHQ6NVY1 386 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 C4orf22Q6V702 233 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 PPP1R21Q6ZMI0 780 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 BBS12Q6ZW61 710 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 CENPUQ71F23 418 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 ILDR2Q71H61 639 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SESTD1Q86VW0 696 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 MAP7D3Q8IWC1 876 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 TMEM192Q8IY95 271 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 CNPY4Q8N129 248 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 WDTC1Q8N5D0 677 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 CXorf38Q8TB03 319 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 STK32AQ8WU08 396 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 TEKT4Q8WW24 435 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 CHMP6Q96FZ7 201 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 CPB2Q96IY4 423 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SNX27Q96L92 541 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 XPO6Q96QU8 1125 aaKnown RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 CCT8L2Q96SF2 557 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 CPXM1Q96SM3 734 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 TBCBQ99426 244 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SELENOSQ9BQE4 189 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 FRMD8Q9BZ67 464 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 TRIM6Q9C030 488 aaPredicted RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 ELOVL4Q9GZR5 314 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SDCBP2Q9H190 292 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 ZNF408Q9H9D4 720 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 PRDM16Q9HAZ2 1276 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 UBN1Q9NPG3 1134 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 INTS9Q9NV88 658 aaKnown RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 NINJ2Q9NZG7 142 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 SENP1Q9P0U3 644 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 CNTN3Q9P232 1028 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 FETUBQ9UGM5 382 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 LGALS13Q9UHV8 139 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 TPX2Q9ULW0 747 aaKnown RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 UBQLN1Q9UMX0 589 aaKnown RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 R3HDM2Q9Y2K5 976 aaKnown RBP6.97□□□□□ -1.29
USP28-206ENST00000538224 Q9Y3F1 56 aa6.97□□□□□ -1.29
USP28-206ENST00000538224 MBLAC1A4D2B0 266 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms