RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 PNPLA1Q8N8W4 532 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 TXNDC5Q8NBS9 432 aaKnown RBP12.05□□□□□ -0.48
CLPB-208ENST00000538021 OR2I1PQ8NGU4 316 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 OLIG1Q8TAK6 271 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 MDM1Q8TC05 714 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 SPPL2BQ8TCT7 592 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 C2orf15Q8WU43 125 aaKnown RBP12.05□□□□□ -0.48
CLPB-208ENST00000538021 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 CYP2S1Q96SQ9 504 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 TM6SF1Q9BZW5 370 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 LINC00597Q9H2U6 94 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 PILRBQ9UKJ0 227 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 RAXQ9Y2V3 346 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 DENND4CQ5VZ89 1909 aa12.05□□□□□ -0.48
CLPB-208ENST00000538021 E9PMD0 336 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 MCL1Q07820 350 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 SMARCB1Q12824 385 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 HNRNPDQ14103 355 aaKnown RBP12.04□□□□□ -0.48
CLPB-208ENST00000538021 TRIP6Q15654 476 aaKnown RBP12.04□□□□□ -0.48
CLPB-208ENST00000538021 ZNF77Q15935 545 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 SPATA1Q5VX52 437 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 LRRTM3Q86VH5 581 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 PIAS4Q8N2W9 510 aaPredicted RBP12.04□□□□□ -0.48
CLPB-208ENST00000538021 ALLCQ8N6M5 410 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 CEP76Q8TAP6 659 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 HMGB4Q8WW32 186 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 BICD1Q96G01 975 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 CAMK1GQ96NX5 476 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 SLC22A12Q96S37 553 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 RUSC1Q9BVN2 902 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 HAPLN2Q9GZV7 340 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
CLPB-208ENST00000538021 POLMQ9NP87 494 aaPredicted RBP12.04□□□□□ -0.48
CLPB-208ENST00000538021 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 DSEQ9UL01 958 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 DNM3Q9UQ16 869 aa12.04□□□□□ -0.48
CLPB-208ENST00000538021 TNRC6BQ9UPQ9 1833 aaKnown RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 TRAV19A0A0A6YYK7 116 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 CYB561D2O14569 222 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 SH3BP5O60239 455 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 KLF8O95600 359 aaPredicted RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 NFATC1O95644 943 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 CYP11A1P05108 521 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 USP17L7P0C7H9 530 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 FTH1P19P0C7X4 201 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 CSH1P0DML2 217 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 CSH2P0DML3 217 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 CD59P13987 128 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 TIE1P35590 1138 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 OPRD1P41143 372 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 SMTNP53814 917 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 MRPS21P82921 87 aaKnown RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 RAD51AP2Q09MP3 1159 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 MAPK7Q13164 816 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 BYSLQ13895 437 aaKnown RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 SPDYCQ5MJ68 293 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 C9orf57Q5W0N0 161 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 RINT1Q6NUQ1 792 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 CCNI2Q6ZMN8 369 aaPredicted RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 DCP1BQ8IZD4 617 aaKnown RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 TMEM161BQ8NDZ6 487 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 GLIS3Q8NEA6 775 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 SH3RF2Q8TEC5 729 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 ADAMTS14Q8WXS8 1223 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 PYM1Q9BRP8 204 aaKnown RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 PI4K2AQ9BTU6 479 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 C17orf75Q9HAS0 396 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 PCDHB5Q9Y5E4 795 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 ANK1P16157 1881 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 PTPRDP23468 1912 aa12.03□□□□□ -0.48
CLPB-208ENST00000538021 HELZ2Q9BYK8 2649 aaKnown RBP12.03□□□□□ -0.48
CLPB-208ENST00000538021 TSC2P49815 1807 aa12.02□□□□□ -0.48
CLPB-208ENST00000538021 SGK1O00141 431 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 PIRO00625 290 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 ARHGAP33O14559 1287 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 AP5Z1O43299 807 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 TADA3O75528 432 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 SERPINF2P08697 491 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 MAPTP10636 758 aaKnown RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 PAX3P23760 479 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 HOXD12P35452 270 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 RPL6Q02878 288 aaKnown RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 USP4Q13107 963 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 ENOX2Q16206 610 aaKnown RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 DDR2Q16832 855 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 ZC2HC1CQ53FD0 456 aaPredicted RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 PEAR1Q5VY43 1037 aaPredicted RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 WSCD1Q658N2 575 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 ARL14EPQ8N8R7 260 aaPredicted RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 NTPCRQ9BSD7 190 aaKnown RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 TMEM206Q9H813 350 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms