RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 USP37Q86T82 979 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 PKNOX2Q96KN3 472 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 OXCT2Q9BYC2 517 aaPredicted RBP12.29□□□□□ -0.44
SNHG1-206ENST00000537925 NUCKS1Q9H1E3 243 aaKnown RBP12.29□□□□□ -0.44
SNHG1-206ENST00000537925 S1PR5Q9H228 398 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 PLEKHA4Q9H4M7 779 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 MAN1C1Q9NR34 630 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 GDAP2Q9NXN4 497 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 FBXL5Q9UKA1 691 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 DSEQ9UL01 958 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 SIK3Q9Y2K2 1263 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 DOCK8Q8NF50 2099 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 SLC16A3O15427 465 aaKnown RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 MBTPS2O43462 519 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 ABLIM3O94929 683 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 PAPLNO95428 1278 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 GNA14O95837 355 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 SPATA31D3P0C874 917 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 KRT13P13646 458 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 PRLRP16471 622 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 MARSP56192 900 aaKnown RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 ROR1Q01973 937 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 MYO1EQ12965 1108 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 SMAD4Q13485 552 aaKnown RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 CLUL1Q15846 466 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 ZACNQ401N2 412 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 CTXN3Q4LDR2 81 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 CCDC122Q5T0U0 273 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 TDRD10Q5VZ19 366 aaKnown RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 OVOS1Q6IE37 1185 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 IQCEQ6IPM2 695 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 PTCRAQ6ISU1 281 aaPredicted RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 C15orf39Q6ZRI6 1047 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 SPATA31D4Q6ZUB0 917 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 ZNF572Q7Z3I7 529 aaPredicted RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 LIMS2Q7Z4I7 341 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 KIAA1328Q86T90 577 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 JAKMIP2Q96AA8 810 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 HPDLQ96IR7 371 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 NDST4Q9H3R1 872 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 NHEJ1Q9H9Q4 299 aaPredicted RBP12.28□□□□□ -0.44
SNHG1-206ENST00000537925 PSD3Q9NYI0 1048 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 DPP7Q9UHL4 492 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 FBXW11Q9UKB1 542 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 MYH10P35580 1976 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 GREB1Q4ZG55 1949 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 DENND4CQ5VZ89 1909 aa12.28□□□□□ -0.44
SNHG1-206ENST00000537925 WDR27A2RRH5 827 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 CCDC66A2RUB6 948 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 OR6C75A6NL08 312 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 SEC31AO94979 1220 aaKnown RBP12.27□□□□□ -0.44
SNHG1-206ENST00000537925 VNN1O95497 513 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 TRIM49P0CI25 452 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 TRIM49CP0CI26 452 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 EPB41P11171 864 aaKnown RBP12.27□□□□□ -0.44
SNHG1-206ENST00000537925 ATICP31939 592 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 PPP3CAQ08209 521 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 WSCD1Q658N2 575 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 SV2AQ7L0J3 742 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 DPH6Q7L8W6 267 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 TMEM86AQ8N2M4 240 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 C12orf76Q8N812 135 aaPredicted RBP12.27□□□□□ -0.44
SNHG1-206ENST00000537925 KREMEN2Q8NCW0 462 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 CMASQ8NFW8 434 aaPredicted RBP12.27□□□□□ -0.44
SNHG1-206ENST00000537925 ZNF461Q8TAF7 563 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 SYN2Q92777 582 aaPredicted RBP12.27□□□□□ -0.44
SNHG1-206ENST00000537925 RTP3Q9BQQ7 232 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 SFXN1Q9H9B4 322 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 VIPAS39Q9H9C1 493 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 L1RE1Q9UN81 338 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 SNX9Q9Y5X1 595 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 SAR1BQ9Y6B6 198 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 BDP1A6H8Y1 2624 aa12.27□□□□□ -0.44
SNHG1-206ENST00000537925 MYO10Q9HD67 2058 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 MUC3AQ02505 3323 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 SSU72P8A0A1W2PR75 194 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.45
SNHG1-206ENST00000537925 PJA2O43164 708 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 HUS1O60921 280 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 PHACTR2O75167 634 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 GTF2H1P32780 548 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 MYL6P60660 151 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
SNHG1-206ENST00000537925 BIRC3Q13489 604 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 TRPC3Q13507 836 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 SMAD2Q15796 467 aaKnown RBP12.27□□□□□ -0.45
SNHG1-206ENST00000537925 SOWAHAQ2M3V2 549 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 TPGS2Q68CL5 300 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 ELMSAN1Q6PJG2 1045 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 METTL23Q86XA0 190 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 TOP6BLQ8N6T0 577 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 TRIM58Q8NG06 486 aa12.27□□□□□ -0.45
SNHG1-206ENST00000537925 SPATA18Q8TC71 538 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms