RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TSC22D3Q99576 134 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 PDCD2LQ9BRP1 358 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MANSC1Q9H8J5 431 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 KLHL11Q9NVR0 708 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ARHGAP28Q9P2N2 729 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 HACL1Q9UJ83 578 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 POLIQ9UNA4 740 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ASB3Q9Y575 518 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 STYXL1Q9Y6J8 313 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 TCRBV5S1A1TA0A578 114 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 A8MXQ7 604 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 SGK1O00141 431 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 VWA5AO00534 786 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 DGAT1O75907 488 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 PSMG1O95456 288 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 VNN1O95497 513 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 CCNE2O96020 404 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 GSTA2P09210 222 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 DHRS4L1P0CG22 281 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 TNNI1P19237 187 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 SP100P23497 879 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-218ENST00000537641 CDKN2BP42772 138 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF132P52740 706 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 SARNPP82979 210 aaKnown RBP12.75□□□□□ -0.37
CPSF7-218ENST00000537641 SLC34A1Q06495 639 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 DGKZQ13574 1117 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 PIGHQ14442 188 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-218ENST00000537641 WDR72Q3MJ13 1102 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 PLEKHG4Q58EX7 1191 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 ZFYVE27Q5T4F4 411 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 DNAJC24Q6P3W2 148 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 CCDC62Q6P9F0 684 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 TMEM154Q6P9G4 183 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 TMEM270Q6UE05 265 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 CAPN12Q6ZSI9 719 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 ANO5Q75V66 913 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 POLNQ7Z5Q5 900 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 NAT8LQ8N9F0 302 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 RFWD2Q8NHY2 731 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 TCP10LQ8TDR4 215 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 ZFAND2BQ8WV99 257 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 DCAKDQ8WVC6 231 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 CGRRF1Q99675 332 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 TSSK1BQ9BXA7 367 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 SYNCQ9H7C4 482 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 AS3MTQ9HBK9 375 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 ARL8BQ9NVJ2 186 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 HEY2Q9UBP5 337 aa12.75□□□□□ -0.37
CPSF7-218ENST00000537641 IQANK1A0A1B0GTG1 560 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 PIGRP01833 764 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 PDHA1P08559 390 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 CFHP08603 1231 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 MYCLP12524 364 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 LIG4P49917 911 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 NEK3P51956 506 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF252P-AS1Q0IIN9 211 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 TFDP1Q14186 410 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 RCN1Q15293 331 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ATP13A4Q4VNC1 1196 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 KHDC1Q4VXA5 237 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 AP1ARQ63HQ0 302 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 RFWD3Q6PCD5 774 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SLC30A9Q6PML9 568 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 TAS1R3Q7RTX0 852 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ANKMY2Q8IV38 441 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SCYL3Q8IZE3 742 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 UBR7Q8N806 425 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 PPFIBP2Q8ND30 876 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ATP6V0A1Q93050 837 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 APOPT1Q96IL0 206 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 CEP170P1Q96L14 293 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 APOBEC3GQ9HC16 384 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 PDLIM7Q9NR12 457 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 STX18Q9P2W9 335 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF212Q9UDV6 495 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF112Q9UJU3 913 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 EME2A4GXA9 379 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ENO4A6NNW6 628 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 GYG2O15488 501 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SNUPNO95149 360 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 CCND2P30279 289 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 OAZ1P54368 228 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 BACE1P56817 501 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 NOP14P78316 857 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ROR2Q01974 943 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SLC18A2Q05940 514 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 AP1B1Q10567 949 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 EFTUD2Q15029 972 aaKnown RBP eCLIP12.74□□□□□ -0.372e-7■■■■■ 31.2
CPSF7-218ENST00000537641 PRKD1Q15139 912 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 RBBP5Q15291 538 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 NBPF20Q3BBV1 942 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ACSBG2Q5FVE4 666 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms