RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ECEL1O95672 775 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 CCND3P30281 292 aaPredicted RBP23.94■■□□□ 1.42
HMGA2-206ENST00000536545 GBP1P32455 592 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 PTPN7P35236 360 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 KCNJ1P48048 391 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 NFX1Q12986 1120 aaKnown RBP23.94■■□□□ 1.42
HMGA2-206ENST00000536545 LIMS2Q7Z4I7 341 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 TMC3Q7Z5M5 1100 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 ACOT1Q86TX2 421 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 RCOR2Q8IZ40 523 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 KLHDC9Q8NEP7 349 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 KBTBD7Q8WVZ9 684 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 FMO2Q99518 471 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 SNX24Q9Y343 169 aa23.94■■□□□ 1.42
HMGA2-206ENST00000536545 CST5P28325 142 aaPredicted RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 RPL21P46778 160 aaKnown RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 SLC25A11Q02978 314 aaKnown RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 UAP1Q16222 522 aaPredicted RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 ATP13A4Q4VNC1 1196 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 FAM47CQ5HY64 1035 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 PPP1R26Q5T8A7 1209 aaPredicted RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 TXNRD3NBQ6F5E7 133 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 CCSAPQ6IQ19 270 aaPredicted RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 POLNQ7Z5Q5 900 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 ARFGAP1Q8N6T3 406 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 HEMGNQ9BXL5 484 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 PTGESO14684 152 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 CHRNA1P02708 482 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 RPLP2P05387 115 aaKnown RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 PRKAR2AP13861 404 aaKnown RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 HSD17B3P37058 310 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 GYS2P54840 703 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 TTC30AQ86WT1 665 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 RNF25Q96BH1 459 aaPredicted RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 TXLNGYQ9BZA5 131 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 GOLGA2P5Q9HBQ8 144 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 DDX56Q9NY93 547 aaKnown RBP23.93■■□□□ 1.42
HMGA2-206ENST00000536545 ST3GAL5Q9UNP4 418 aa23.93■■□□□ 1.42
HMGA2-206ENST00000536545 KPNA7A9QM74 516 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 OPA1O60313 960 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 LRCH4O75427 683 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 RPS6KA5O75582 802 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 ASGR1P07306 291 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 CTSHP09668 335 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 SETSIPP0DME0 302 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 TAF6P49848 677 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 COPS2P61201 443 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 ARHGAP17Q68EM7 881 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 EMC1Q8N766 993 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 PPP1R10Q96QC0 940 aaKnown RBP23.92■■□□□ 1.42
HMGA2-206ENST00000536545 RUFY1Q96T51 708 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 MIS12Q9H081 205 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 HOMER3Q9NSC5 361 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 FAM49BQ9NUQ9 324 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 PTPN22Q9Y2R2 807 aa23.92■■□□□ 1.42
HMGA2-206ENST00000536545 E5RJQ4 531 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 PI4K2BG5E9Z4 385 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 FGFR1P11362 822 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 ELNP15502 786 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 LRPAP1P30533 357 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 CETN2P41208 172 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 SP3Q02447 781 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 SNX1Q13596 522 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 SV2CQ496J9 727 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 MFSD7Q6UXD7 560 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 SPOCD1Q6ZMY3 1216 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 SYDE1Q6ZW31 735 aaPredicted RBP23.91■■□□□ 1.42
HMGA2-206ENST00000536545 OR6B3Q8NGW1 331 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 DPEP3Q9H4B8 488 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 RNF186Q9NXI6 227 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 GRIN2DO15399 1336 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 PPFIA2O75334 1257 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 KRT17Q04695 432 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 MTMR3Q13615 1198 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 KCNA10Q16322 511 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 CCNG2Q16589 344 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 FAM102AQ5T9C2 384 aaPredicted RBP23.91■■□□□ 1.42
HMGA2-206ENST00000536545 FAM183BPQ6ZVS7 135 aa23.91■■□□□ 1.42
HMGA2-206ENST00000536545 GOLGA8KD6RF30 607 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 PTK6Q13882 451 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 FBXO25Q8TCJ0 367 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 GRK7Q8WTQ7 553 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 RAPGEF5Q92565 580 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 FAM129AQ9BZQ8 928 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 CHST12Q9NRB3 414 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 FAM105AQ9NUU6 356 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 ADAM21Q9UKJ8 722 aa23.9■■□□□ 1.42
HMGA2-206ENST00000536545 hCG_1818297A0A087WSY0 165 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 A8MXQ7 604 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 HCRTO43612 131 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 IL1R2P27930 398 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 CDKN2BP42772 138 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 PLTPP55058 493 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 ADCY2Q08462 1091 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 PPP1R7Q15435 360 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 LRIG3Q6UXM1 1119 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 CRYBG2Q8N1P7 616 aa23.89■■□□□ 1.42
HMGA2-206ENST00000536545 ACSF2Q96CM8 615 aaPredicted RBP23.89■■□□□ 1.42
HMGA2-206ENST00000536545 PIWIL1Q96J94 861 aaKnown RBP23.89■■□□□ 1.42
HMGA2-206ENST00000536545 CAPNS2Q96L46 248 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms